RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.43□□□□□ -0.9
COPB1-202ENST00000439561 SATL1Q86VE3 508 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 CDR2LQ86X02 465 aaPredicted RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 TDRPQ86YL5 185 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 THNSL1Q8IYQ7 743 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 GMCL1P1Q8NEA9 526 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 TMC2Q8TDI7 906 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 BSNDQ8WZ55 320 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 PANX3Q96QZ0 392 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 EBF4Q9BQW3 602 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 TBC1D22BQ9NU19 505 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 ETNK2Q9NVF9 386 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 SOX13Q9UN79 622 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 DCAF8L1A6NGE4 600 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 E5RJQ4 531 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 CD48P09326 243 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 RAG1P15918 1043 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 PEX2P28328 305 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 MSX2P35548 267 aaPredicted RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 PIGHQ14442 188 aaPredicted RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 SLC27A3Q5K4L6 730 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 ADGRD1Q6QNK2 874 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 SH3BP5LQ7L8J4 393 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 SLC26A11Q86WA9 606 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 MMP19Q99542 508 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 KLHL4Q9C0H6 718 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 Q9H521 79 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 GALNT8Q9NY28 637 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 ZNF711Q9Y462 761 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 OR6B1O95007 311 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 TOP3BO95985 862 aaKnown RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 FAM200BP0CF97 657 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 OSBPP22059 807 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 RFC1P35251 1148 aaPredicted RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 FOXB2Q5VYV0 432 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 ANO5Q75V66 913 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 MAP4K3Q8IVH8 894 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 DTNBP1Q96EV8 351 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 PTCD3Q96EY7 689 aaKnown RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 TIPINQ9BVW5 301 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 SPATA16Q9BXB7 569 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 GLIS2Q9BZE0 524 aaPredicted RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 GRIP2Q9C0E4 1043 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 MIS12Q9H081 205 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 GPATCH2LQ9NWQ4 482 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 SEPT10Q9P0V9 454 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 KANSL3Q9P2N6 904 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 DTNAQ9Y4J8 743 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 NUB1Q9Y5A7 615 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 IRS2Q9Y4H2 1338 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 TRAFD1O14545 582 aaPredicted RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 GRIN3BO60391 1043 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 DKC1O60832 514 aaKnown RBP eCLIP9.42□□□□□ -0.9
COPB1-202ENST00000439561 RNASEH1O60930 286 aaKnown RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 SRGAP2CP0DJJ0 459 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 AQP4P55087 323 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 MMRN1Q13201 1228 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 R3HDM1Q15032 1099 aaKnown RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 GSTA3Q16772 222 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 FAM102AQ5T9C2 384 aaPredicted RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 OR6B2Q6IFH4 312 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 NET1Q7Z628 596 aaPredicted RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 MCF2L2Q86YR7 1114 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 SP8Q8IXZ3 490 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 PRMT6Q96LA8 375 aaPredicted RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 NR1H4Q96RI1 486 aaPredicted RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 AGO4Q9HCK5 861 aaKnown RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 XAB2Q9HCS7 855 aaKnown RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 SMYD2Q9NRG4 433 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.42□□□□□ -0.9
COPB1-202ENST00000439561 FIS1Q9Y3D6 152 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 ASB3Q9Y575 518 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 ITGB4P16144 1822 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 MYH14Q7Z406 1995 aaKnown RBP9.42□□□□□ -0.9
COPB1-202ENST00000439561 KIAA1551Q9HCM1 1747 aa9.42□□□□□ -0.9
COPB1-202ENST00000439561 E9PBE3 544 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ECE2O60344 883 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 KLHL41O60662 606 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 TM7SF2O76062 418 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 CLPTM1O96005 669 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 DLDP09622 509 aaKnown RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 ADRA2BP18089 450 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 TBXAS1P24557 533 aaPredicted RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 CDK7P50613 346 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 SESN2P58004 480 aaPredicted RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 USP46P62068 366 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 RPS6P62753 249 aaKnown RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 C1QBPQ07021 282 aaKnown RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 ZBTB41Q5SVQ8 909 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 DHDDSQ86SQ9 333 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 MAP7D3Q8IWC1 876 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 OR5B17Q8NGF7 314 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 FAM136AQ96C01 138 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ADPGKQ9BRR6 497 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 MTMR12Q9C0I1 747 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 KLC2Q9H0B6 622 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 FBXO40Q9UH90 709 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 PCDHA10Q9Y5I2 948 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 AK5Q9Y6K8 562 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms