RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PATJQ8NI35 1801 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 FAM92AA1XBS5 289 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 BTNL10A8MVZ5 291 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 CCP110O43303 1012 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 BEST1O76090 585 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 GLI1P08151 1106 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 CSH1P0DML2 217 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 CSH2P0DML3 217 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 SSTR3P32745 418 aaPredicted RBP13.36□□□□□ -0.27
SCLT1-202ENST00000439369 VAV2P52735 878 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 EPHB3P54753 998 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 TCEAL1Q15170 157 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 TOGARAM2Q6ZUX3 1019 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 ITIH5Q86UX2 942 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 NUP93Q8N1F7 819 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 SIX6OS1Q8N1H7 587 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 TTC9BQ8N6N2 239 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 TRMT2BQ96GJ1 504 aaKnown RBP13.36□□□□□ -0.27
SCLT1-202ENST00000439369 KCNK16Q96T55 309 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 TTLL2Q9BWV7 592 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 ST7Q9NRC1 585 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 ZDHHC7Q9NXF8 308 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 TAS2R14Q9NYV8 317 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 SLC27A5Q9Y2P5 690 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 PCDHGC5Q9Y5F6 944 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 USP3Q9Y6I4 520 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
SCLT1-202ENST00000439369 SCINQ9Y6U3 715 aa13.36□□□□□ -0.27
SCLT1-202ENST00000439369 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-202ENST00000439369 TMCO5BA8MYB1 307 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 E5RJQ4 531 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 TULP2O00295 520 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 PJA2O43164 708 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 ZSCAN12O43309 604 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 NCK2O43639 380 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 ZMYND10O75800 440 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 CYP1A2P05177 515 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 C8AP07357 584 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 SRGAP2BP0DMP2 458 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 ATF6P18850 670 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 SLC5A3P53794 718 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 GALCP54803 685 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 GPC5P78333 572 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 KCNC3Q14003 757 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 PM20D1Q6GTS8 502 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 TMEM184AQ6ZMB5 413 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 MMS22LQ6ZRQ5 1243 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 DENND5BQ6ZUT9 1274 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 ARCQ7LC44 396 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 RHOT2Q8IXI1 618 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 ARHGAP18Q8N392 663 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 C3orf20Q8ND61 904 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 SLC7A14Q8TBB6 771 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 CASP10Q92851 521 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 MCRS1Q96EZ8 462 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 MYRFLQ96LU7 910 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 ZNF830Q96NB3 372 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-202ENST00000439369 C11orf70Q9BRQ4 267 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 TSGA10Q9BZW7 698 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 MRPL47Q9HD33 250 aaKnown RBP13.35□□□□□ -0.27
SCLT1-202ENST00000439369 KCND1Q9NSA2 647 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 PARVAQ9NVD7 372 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 UXTQ9UBK9 157 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-202ENST00000439369 LCMT1Q9UIC8 334 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 SCML2Q9UQR0 700 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 REXO2Q9Y3B8 237 aaKnown RBP13.35□□□□□ -0.27
SCLT1-202ENST00000439369 HCFC2Q9Y5Z7 792 aa13.35□□□□□ -0.27
SCLT1-202ENST00000439369 RFXAPO00287 272 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 SOX1O00570 391 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-202ENST00000439369 GABBR2O75899 941 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 ZBED1O96006 694 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 LRG1P02750 347 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 ERBB2P04626 1255 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 PPP3CCP48454 512 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 NRIP1P48552 1158 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 PSEN1P49768 467 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 RGS7P49802 495 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 TKTL1P51854 596 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 ADIGQ0VDE8 80 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 TWF1Q12792 350 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 GRIN2CQ14957 1233 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 DDR2Q16832 855 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 EFHC1Q5JVL4 640 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 PPM1LQ5SGD2 360 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 PLEKHA7Q6IQ23 1121 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 BEND5Q7L4P6 421 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 SLC26A9Q7LBE3 791 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 ADGRD2Q7Z7M1 963 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 KIAA1328Q86T90 577 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 XYLT1Q86Y38 959 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 ELMOD1Q8N336 334 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 EFHBQ8N7U6 833 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 LEMD2Q8NC56 503 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 ACRBPQ8NEB7 543 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 PDZD8Q8NEN9 1154 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-202ENST00000439369 RFFLQ8WZ73 363 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms