RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 EFHC1Q5JVL4 640 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 CPXCR1Q8N123 301 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 PDIK1LQ8N165 341 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 FEZF2Q8TBJ5 459 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 ZNF398Q8TD17 642 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 DCAF4Q8WV16 495 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 HSPH1Q92598 858 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 HAPLN3Q96S86 360 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 CALN1Q9BXU9 219 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 APOBEC3GQ9HC16 384 aaKnown RBP13.95□□□□□ -0.18
ACTN1-204ENST00000438964 TBX20Q9UMR3 447 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 INPP5FQ9Y2H2 1132 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 ZNF711Q9Y462 761 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 PCDHB2Q9Y5E7 798 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 TNRC6CQ9HCJ0 1690 aaKnown RBP13.95□□□□□ -0.18
ACTN1-204ENST00000438964 hCG_1818297A0A087WSY0 165 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 SUPT3HO75486 399 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 ITGBL1O95965 494 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-204ENST00000438964 HLA-DRAP01903 254 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 NPTX2P47972 431 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 RPL10AP62906 217 aaKnown RBP13.95□□□□□ -0.18
ACTN1-204ENST00000438964 CCNIQ14094 377 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 MAP7Q14244 749 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 KRT72Q14CN4 511 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 PDK1Q15118 436 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 NADK2Q4G0N4 442 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 RAB6CQ53S08 254 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 PRR5LQ6MZQ0 368 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 KLHDC10Q6PID8 442 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 ACAD11Q709F0 780 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 LCA5Q86VQ0 697 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 DEFB107AQ8IZN7 70 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 FAM172AQ8WUF8 416 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 FAM163AQ96GL9 167 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-204ENST00000438964 ZBTB45Q96K62 511 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-204ENST00000438964 PRPF18Q99633 342 aaKnown RBP13.95□□□□□ -0.18
ACTN1-204ENST00000438964 RAB6CQ9H0N0 254 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 UBAP1Q9NZ09 502 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 IL1RAPL1Q9NZN1 696 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 NR2E3Q9Y5X4 410 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 C10orf71Q711Q0 1435 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 UQCRBP14927 111 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 MRPS5P82675 430 aaKnown RBP13.94□□□□□ -0.18
ACTN1-204ENST00000438964 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 TATDN1Q6P1N9 297 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.94□□□□□ -0.18
ACTN1-204ENST00000438964 FAM210AQ96ND0 272 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 CSRNP1Q96S65 589 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 TMOD2Q9NZR1 351 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 ZNRF3Q9ULT6 936 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 FZD1Q9UP38 647 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 VILLO15195 856 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 P4HA2O15460 535 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 MYCLP12524 364 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-204ENST00000438964 IL1R2P27930 398 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 CYP24A1Q07973 514 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 ACBD5Q5T8D3 534 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-204ENST00000438964 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 DPH6Q7L8W6 267 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 NCAPG2Q86XI2 1143 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 PPIL6Q8IXY8 311 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 NME8Q8N427 588 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 PGLYRP2Q96PD5 576 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 ARHGEF38Q9NXL2 777 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 SHOC2Q9UQ13 582 aa13.94□□□□□ -0.18
ACTN1-204ENST00000438964 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-204ENST00000438964 MAGEC1O60732 1142 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 DGKIO75912 1065 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 RAD17O75943 681 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 SLC18A1P54219 525 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 MAP3K10Q02779 954 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 LMNB2Q03252 620 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 DGKZQ13574 1117 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 KLHL38Q2WGJ6 581 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 TDRD10Q5VZ19 366 aaKnown RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 PTAR1Q7Z6K3 402 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 ARHGAP18Q8N392 663 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 CLMNQ96JQ2 1002 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 PLEKHG4BQ96PX9 1271 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 TUBB6Q9BUF5 446 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 USP29Q9HBJ7 922 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 KMT5AQ9NQR1 393 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 COL20A1Q9P218 1284 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 UBE4BO95155 1302 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 MYO18AQ92614 2054 aaKnown RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 A0A0J9YVX5 310 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 IQANK1A0A1B0GTG1 560 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 BOLA2-SMG1P6H3BVE0 249 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 ADCY3O60266 1144 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 PABPC4LP0CB38 370 aaKnown RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 EIF2AK2P19525 551 aaKnown RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 GTF2H1P32780 548 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 CDKN2BP42772 138 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 CYTH1Q15438 398 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 TFDP3Q5H9I0 405 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 ATG14Q6ZNE5 492 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 RCOR2Q8IZ40 523 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms