RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TRIM36Q9NQ86 728 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 NECTIN3Q9NQS3 549 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 FNIP2Q9P278 1114 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 DNAJB11Q9UBS4 358 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 PACSIN3Q9UKS6 424 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 TBC1D30Q9Y2I9 924 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 EPN1Q9Y6I3 576 aaPredicted RBP4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 ADGRA2Q96PE1 1338 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 WDR27A2RRH5 827 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 FOXN1O15353 648 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 CCNT2O60583 730 aaKnown RBP4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 RAMP2O60895 175 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 LDHAP00338 332 aaKnown RBP4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 CHRM2P08172 466 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 ABCB4P21439 1286 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 UQCRC1P31930 480 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 ACVRL1P37023 503 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 GRIA3P42263 894 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 PGDP52209 483 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 STK3Q13188 491 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 STARD3Q14849 445 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 KRT72Q14CN4 511 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 MPEG1Q2M385 716 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 FAXCQ5TGI0 409 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 ARL6IP4Q66PJ3 421 aaKnown RBP4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 IGFL4Q6B9Z1 124 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 MRNIPQ6NTE8 343 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 XRRA1Q6P2D8 792 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 MTHFD1LQ6UB35 978 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 ZNF551Q7Z340 670 aaPredicted RBP4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 WDR53Q7Z5U6 358 aaPredicted RBP4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 KCTD20Q7Z5Y7 419 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 GLG1Q92896 1179 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 KIAA1191Q96A73 305 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 PSMD1Q99460 953 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 C17orf80Q9BSJ5 609 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 DPCDQ9BVM2 203 aaPredicted RBP4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 STK33Q9BYT3 514 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 TAGLN3Q9UI15 199 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 HPSEQ9Y251 543 aa4.49□□□□□ -1.69
LSM1P1-201ENST00000438629 GRID2IPA4D2P6 1211 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 M0R3H8 397 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 FFAR2O15552 330 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 URI1O94763 535 aaPredicted RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TTLL1O95922 423 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 NR2F6P10588 404 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 NDUFB7P17568 137 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TYRP1P17643 537 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 ADORA2AP29274 412 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 LIPAP38571 399 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 ITGA8P53708 1063 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 PDE1AP54750 535 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 INHBCP55103 352 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TIRAPP58753 221 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TIAL1Q01085 375 aaKnown RBP eCLIP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TNFAIP2Q03169 654 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 DPTQ07507 201 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 CHAF1AQ13111 956 aaPredicted RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 ZNF169Q14929 603 aaPredicted RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 MAPKAPK3Q16644 382 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TXNRD1Q16881 649 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TREML2Q5T2D2 321 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 MANEALQ5VSG8 457 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 GRASPQ7Z6J2 395 aaPredicted RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 MRGPRGQ86SM5 289 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 Q8N1X5 172 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 NGDNQ8NEJ9 315 aaKnown RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 RP9Q8TA86 221 aaKnown RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 CAGE1Q8TC20 777 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 ACTRT2Q8TDY3 377 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 ABHD5Q8WTS1 349 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TMEM171Q8WVE6 324 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 SOCS4Q8WXH5 440 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TFAP2BQ92481 460 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 RFKQ969G6 155 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 HIST1H2AAQ96QV6 131 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TTPALQ9BTX7 342 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 TTLL2Q9BWV7 592 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 WDR12Q9GZL7 423 aaKnown RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 ARHGEF3Q9NR81 526 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 GJB4Q9NTQ9 266 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 RGL1Q9NZL6 768 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 NKX1-2Q9UD57 310 aaPredicted RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 CCNL1Q9UK58 526 aaPredicted RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 CA14Q9ULX7 337 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 MAGED2Q9UNF1 606 aaPredicted RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 DRG1Q9Y295 367 aaKnown RBP4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 PCDHGB2Q9Y5G2 931 aa4.48□□□□□ -1.69
LSM1P1-201ENST00000438629 GOLGA6L3A6NEY3 463 aa4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 ZAR1LA6NP61 321 aa4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 ADM5C9JUS6 153 aa4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 F5H423 210 aaPredicted RBP4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 GCOM1H8Y6P7 765 aaPredicted RBP4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 RHOP08100 348 aa4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 IL6RP08887 468 aaPredicted RBP4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 FAM163BP0C2L3 166 aa4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 EGR1P18146 543 aa4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 GABRB3P28472 473 aa4.47□□□□□ -1.69
LSM1P1-201ENST00000438629 SLC5A2P31639 672 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms