RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 NHEJ1Q9H9Q4 299 aaPredicted RBP19.4■□□□□ 0.7
HDAC6-208ENST00000438518 CNGB3Q9NQW8 809 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 CLDND1Q9NY35 253 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 IL37Q9NZH6 218 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 ADAMTS1Q9UHI8 967 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 STRIP2Q9ULQ0 834 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 PRRC2BQ5JSZ5 2229 aaKnown RBP19.4■□□□□ 0.7
HDAC6-208ENST00000438518 MYO16Q9Y6X6 1858 aa19.39■□□□□ 0.7
HDAC6-208ENST00000438518 CCDC195A0A1B0GUA6 201 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 FAM92AA1XBS5 289 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 SLC38A8A6NNN8 435 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 SART1O43290 800 aaKnown RBP19.39■□□□□ 0.69
HDAC6-208ENST00000438518 AKR1B10O60218 316 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 FBXO21O94952 628 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 CFHP08603 1231 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 CYLC1P35663 651 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-208ENST00000438518 EIF4A3P38919 411 aaKnown RBP19.39■□□□□ 0.69
HDAC6-208ENST00000438518 PPP3CCP48454 512 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 KIF11P52732 1056 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 ASTE1Q2TB18 679 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-208ENST00000438518 PMF1Q6P1K2 205 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 ERICH1Q86X53 443 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 PHF13Q86YI8 300 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-208ENST00000438518 SIX6OS1Q8N1H7 587 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 WDTC1Q8N5D0 677 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 VCPIP1Q96JH7 1222 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.39■□□□□ 0.69
HDAC6-208ENST00000438518 AVENQ9NQS1 362 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-208ENST00000438518 ST7Q9NRC1 585 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 USP3Q9Y6I4 520 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 NCANO14594 1321 aa19.39■□□□□ 0.69
HDAC6-208ENST00000438518 ZNF638Q14966 1978 aaKnown RBP19.39■□□□□ 0.69
HDAC6-208ENST00000438518 DDX3XO00571 662 aaKnown RBP eCLIP19.38■□□□□ 0.69
HDAC6-208ENST00000438518 LINC01565O15544 149 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 RTN2O75298 545 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 RFPL2O75678 378 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 SOAT2O75908 522 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 PLEKP08567 350 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-208ENST00000438518 PTPN2P17706 415 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 MMP8P22894 467 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 GABRB2P47870 512 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 GPR15P49685 360 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 EPHA5P54756 1037 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 GSCP56915 257 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-208ENST00000438518 MYO7AQ13402 2215 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 C10orf76Q5T2E6 689 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 NAA35Q5VZE5 725 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 ACAD10Q6JQN1 1059 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 CES5AQ6NT32 575 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 DNAJB7Q7Z6W7 309 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-208ENST00000438518 GPIHBP1Q8IV16 184 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 OLIG1Q8TAK6 271 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 IRGQQ8WZA9 623 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 TRIM11Q96F44 468 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 SLITRK1Q96PX8 696 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 PPP1R9BQ96SB3 815 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 PCDHB18PQ96TA0 734 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 CHP1Q99653 195 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 TRIM62Q9BVG3 475 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 SYNCQ9H7C4 482 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 LUC7LQ9NQ29 371 aaKnown RBP19.38■□□□□ 0.69
HDAC6-208ENST00000438518 WDR35Q9P2L0 1181 aa19.38■□□□□ 0.69
HDAC6-208ENST00000438518 TULP2O00295 520 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 CCL16O15467 120 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 IPO7O95373 1038 aaKnown RBP19.37■□□□□ 0.69
HDAC6-208ENST00000438518 CALB1P05937 261 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 YWHAQP27348 245 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 SSTR3P32745 418 aaPredicted RBP19.37■□□□□ 0.69
HDAC6-208ENST00000438518 SCNN1AP37088 669 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 PSEN1P49768 467 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 TKTL1P51854 596 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 CDR1P51861 262 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 C1QBPQ07021 282 aaKnown RBP19.37■□□□□ 0.69
HDAC6-208ENST00000438518 PABPC1LQ4VXU2 614 aaKnown RBP19.37■□□□□ 0.69
HDAC6-208ENST00000438518 PM20D1Q6GTS8 502 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 GPR149Q86SP6 731 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 LRRC8AQ8IWT6 810 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 ARHGAP18Q8N392 663 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 GIPC2Q8TF65 315 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 ZNF707Q96C28 371 aaPredicted RBP19.37■□□□□ 0.69
HDAC6-208ENST00000438518 MSLNLQ96KJ4 702 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 ISCUQ9H1K1 167 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 ADAM7Q9H2U9 754 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 PIDD1Q9HB75 910 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 ASAH2Q9NR71 780 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 CLEC1BQ9P126 229 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 ZMYM5Q9UJ78 669 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 NAGPAQ9UK23 515 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 SCML2Q9UQR0 700 aa19.37■□□□□ 0.69
HDAC6-208ENST00000438518 SZT2Q5T011 3432 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 A0A087X0T9 212 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 TBX10O75333 385 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 PTMAP06454 111 aaKnown RBP19.36■□□□□ 0.69
HDAC6-208ENST00000438518 FAM228BP0C875 321 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 MYBL1P10243 752 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 HMGA1P17096 107 aaKnown RBP19.36■□□□□ 0.69
HDAC6-208ENST00000438518 RBM10P98175 930 aaKnown RBP19.36■□□□□ 0.69
HDAC6-208ENST00000438518 ADIGQ0VDE8 80 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 PTPN20Q4JDL3 420 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 CYP4A22Q5TCH4 519 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms