RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SNAP91O60641 907 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 CENPAP49450 140 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 BNIPLQ7Z465 357 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 GLYCTKQ8IVS8 523 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 Q96MT0 163 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 POLR1BQ9H9Y6 1135 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 BAIAP2Q9UQB8 552 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 NCAPD2Q15021 1401 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 AXIN1O15169 862 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 SNAPC5O75971 98 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 ANXA9O76027 345 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 LDLRP01130 860 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 HIRAP54198 1017 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-209ENST00000437951 MAPK11Q15759 364 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 COBLL1Q53SF7 1204 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 KCTD1Q719H9 257 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 DMTF1Q9Y222 760 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 GCP02774 474 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 RBP1P09455 135 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 GTF2IP78347 998 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 ATP2C1P98194 919 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-209ENST00000437951 HSF2Q03933 536 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 KCNMA1Q12791 1236 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 TNFAIP8L3Q5GJ75 292 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 CDK20Q8IZL9 346 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 GPAMQ9HCL2 828 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 FHOD1Q9Y613 1164 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 A0A087WWV3 80 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 FAM92AA1XBS5 289 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 POTEMA6NI47 508 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 MPOP05164 745 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 CDC42EP1Q00587 391 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 NFYCQ13952 458 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 POTEHQ6S545 545 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 EIF3MQ7L2H7 374 aaKnown RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 UBE2Q1Q7Z7E8 422 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 ADSSL1Q8N142 457 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 SPATA18Q8TC71 538 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 EPB41L4BQ9H329 900 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 TSPAN19P0C672 248 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 FEN1P39748 380 aaKnown RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 IREB2P48200 963 aaKnown RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 ATP6AP1LQ52LC2 224 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 TCHHL1Q5QJ38 904 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 OTOAQ7RTW8 1153 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 THNSL1Q8IYQ7 743 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 ZNF804BA4D1E1 1349 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 FARP2O94887 1054 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 NME3Q13232 169 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 PDIA5Q14554 519 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 SAMD4BQ5PRF9 694 aaKnown RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 MFSD4BQ5TF39 518 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 MARK2Q7KZI7 788 aaKnown RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 ZNF605Q86T29 641 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 DHFR2Q86XF0 187 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 EHD3Q9NZN3 535 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 NCKIPSDQ9NZQ3 722 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 TTC37Q6PGP7 1564 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 PDGFRBP09619 1106 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 CCDC166P0CW27 439 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 PPP2R1BP30154 601 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 NAA30Q147X3 362 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 SCARA3Q6AZY7 606 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 CAMK1DQ8IU85 385 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 LATS2Q9NRM7 1088 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 SHROOM2Q13796 1616 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 EMSYQ7Z589 1322 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 CES2O00748 559 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 EFNA5P52803 228 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 MTDHQ86UE4 582 aaKnown RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 ZNF589Q86UQ0 364 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 ACTRT1Q8TDG2 376 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 MYDGFQ969H8 173 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 EDC3Q96F86 508 aaKnown RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 TEX46H3BTG2 121 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 FBLN1P23142 703 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 SLC26A3P40879 764 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 BCAMP50895 628 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 SLC15A2Q16348 729 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 DHRSXQ8N5I4 330 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
PTCH1-209ENST00000437951 SLC30A1Q9Y6M5 507 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 PTCH1Q13635 1447 aa11.91□□□□□ -0.5
PTCH1-209ENST00000437951 LOC100653049A0A140TA62 436 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 DDHD2O94830 711 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 GDF11O95390 407 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 P4HBP07237 508 aaKnown RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 PAICSP22234 425 aaKnown RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 RPL5P46777 297 aaKnown RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 EFR3AQ14156 821 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 NEK5Q6P3R8 708 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 IZUMO1Q8IYV9 350 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 PDPRQ8NCN5 879 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 RNASE11Q8TAA1 199 aaKnown RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ASB2Q96Q27 587 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ANKRD6Q9Y2G4 727 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 AP1G2O75843 785 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms