RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	CBWD2	Q8IUF1	395 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	WDR75	Q8IWA0	830 aa	Known RBP	6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TMEM192	Q8IY95	271 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ANKRD20A12P	Q8NF67	263 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	GIMAP1	Q8WWP7	306 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CCDC74A	Q96AQ1	378 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CCDC127	Q96BQ5	260 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ANKRD36BP1	Q96IX9	119 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SAMD11	Q96NU1	681 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CASD1	Q96PB1	797 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SRRT	Q9BXP5	876 aa	Known RBP	6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	DNAJC25	Q9H1X3	360 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SLC28A3	Q9HAS3	691 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	OSGEP	Q9NPF4	335 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	DMAC2	Q9NW81	257 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	EVL	Q9UI08	416 aa	Predicted RBP	6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	DERA	Q9Y315	318 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	RWDD3	Q9Y3V2	267 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	PCDHB12	Q9Y5F1	795 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TET1	Q8NFU7	2136 aa		6.61	□□□□□ -1.35
ECHDC1-208	ENST00000436638	MICAL3	Q7RTP6	2002 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	HTT	P42858	3142 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638		A0A096LPE4	126 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SMIM28	A0A1B0GU29	152 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638		A0A1W2PPZ6	126 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TTC26	A0AVF1	554 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	GOLGA6L19	H0YKK7	550 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	RBAK-RBAKDN	I3L0D1	243 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	MAPK13	O15264	365 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SLC16A3	O15427	465 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ZC3H11A	O75152	810 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	KIAA0754	O94854	1291 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	BPNT1	O95861	308 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	KCNE1	P15382	129 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	MTIF2	P46199	727 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ALDH7A1	P49419	539 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CASP4	P49662	377 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ZNF165	P49910	485 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	GTF2A1	P52655	376 aa	Predicted RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	AP3M2	P53677	418 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	HTRA4	P83105	476 aa	Predicted RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SMAD3	P84022	425 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	MYL5	Q02045	173 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SPAG1	Q07617	926 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CYP24A1	Q07973	514 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TUSC3	Q13454	348 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	BIRC3	Q13489	604 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TRPC3	Q13507	836 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SEPT7	Q16181	437 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SPRED3	Q2MJR0	410 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	LRIT3	Q3SXY7	679 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	DCAF17	Q5H9S7	520 aa	Predicted RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	NKAPL	Q5M9Q1	402 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	KIAA0319	Q5VV43	1072 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	JADE1	Q6IE81	842 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CRELD2	Q6UXH1	353 aa	Predicted RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	C11orf57	Q6ZUT1	292 aa	Predicted RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CCNJL	Q8IV13	435 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CCDC150	Q8NCX0	1101 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	UBASH3B	Q8TF42	649 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TMEM174	Q8WUU8	243 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TIFA	Q96CG3	184 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ZNF689	Q96CS4	500 aa	Predicted RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	MEGF10	Q96KG7	1140 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	FBXL18	Q96ME1	805 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	UROC1	Q96N76	676 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ZNF558	Q96NG5	402 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TGS1	Q96RS0	853 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CGRRF1	Q99675	332 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	DUSP9	Q99956	384 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TMEM175	Q9BSA9	504 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	COLEC11	Q9BWP8	271 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	XPO4	Q9C0E2	1151 aa	Known RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	NKX2-4	Q9H2Z4	354 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	THAP9	Q9H5L6	903 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	NRDE2	Q9H7Z3	1164 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	MMRN2	Q9H8L6	949 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	PDE11A	Q9HCR9	933 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	RNF19A	Q9NV58	838 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TBC1D13	Q9NVG8	400 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	MIOS	Q9NXC5	875 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	DCAF16	Q9NXF7	216 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	RABL2A	Q9UBK7	228 aa	Predicted RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ARMCX3	Q9UH62	379 aa	Predicted RBP	6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ITM2B	Q9Y287	266 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	PRKAB1	Q9Y478	270 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	NFE2L3	Q9Y4A8	694 aa		6.6	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ARHGEF37	A1IGU5	675 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	GTPBP10	A4D1E9	387 aa	Known RBP	6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	LINC01553	A4QN01	128 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CASTOR2	A6NHX0	329 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	SCAMP3	O14828	347 aa	Known RBP	6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TM4SF5	O14894	197 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	INPPL1	O15357	1258 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	FAM189A1	O60320	539 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	ADAM11	O75078	769 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	N4BP1	O75113	896 aa	Known RBP	6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	TADA2A	O75478	443 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	AKAP3	O75969	853 aa		6.59	□□□□□ -1.35
ECHDC1-208	ENST00000436638	CA3	P07451	260 aa		6.59	□□□□□ -1.35

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