RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 COL6A3P12111 3177 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 CCDC195A0A1B0GUA6 201 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 SSU72P8A0A1W2PR75 194 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 SLC38A8A6NNN8 435 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 E5RJQ4 531 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 AKR1B10O60218 316 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 ADAM15Q13444 863 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 CYP4A22Q5TCH4 519 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 RAD9BQ6WBX8 426 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 DENND5BQ6ZUT9 1274 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 CLEC4CQ8WTT0 213 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 CASP10Q92851 521 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 PPP1R13BQ96KQ4 1090 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 C11orf70Q9BRQ4 267 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 MIS12Q9H081 205 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 HCFC1R1Q9NWW0 138 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 MAFFQ9ULX9 164 aa17.7■□□□□ 0.42
CALD1-209ENST00000436461 LSM8O95777 96 aaKnown RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 ERBB2P04626 1255 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 EPHB3P54753 998 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 CENPCQ03188 943 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 PLD1Q13393 1074 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 RARS2Q5T160 578 aaKnown RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 TRIM72Q6ZMU5 477 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 MMS22LQ6ZRQ5 1243 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 VPS36Q86VN1 386 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 HS6ST3Q8IZP7 471 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 NUP93Q8N1F7 819 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 PPP1R9BQ96SB3 815 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 LRRC4Q9HBW1 653 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 CLEC1BQ9P126 229 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 NOTCH4Q99466 2003 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 ZNF263O14978 683 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 USP17L7P0C7H9 530 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 HMGA1P17096 107 aaKnown RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 LTBRP36941 435 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 NSFP46459 744 aaKnown RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 TKTL1P51854 596 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 CCZ1BP86790 482 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 CCZ1P86791 482 aaPredicted RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 CLUL1Q15846 466 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 SLC18A3Q16572 532 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 CTC1Q2NKJ3 1217 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 SYCE2Q6PIF2 218 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 DNAJB7Q7Z6W7 309 aaPredicted RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 ERICH1Q86X53 443 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 TMTC1Q8IUR5 882 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 ZNF707Q96C28 371 aaPredicted RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 PIWIL1Q96J94 861 aaKnown RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 SPATA17Q96L03 361 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 SLC4A5Q9BY07 1137 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 ULBP1Q9BZM6 244 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 ZNF334Q9HCZ1 680 aaPredicted RBP17.69■□□□□ 0.42
CALD1-209ENST00000436461 NAGPAQ9UK23 515 aa17.69■□□□□ 0.42
CALD1-209ENST00000436461 BRWD1Q9NSI6 2320 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 OBSL1O75147 1896 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 NRG2O14511 850 aaPredicted RBP17.68■□□□□ 0.42
CALD1-209ENST00000436461 C1RP00736 705 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 PGFP49763 221 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 NTHL1P78549 312 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 VEPH1Q14D04 833 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 SKIV2LQ15477 1246 aaKnown RBP17.68■□□□□ 0.42
CALD1-209ENST00000436461 RAB41Q5JT25 222 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 CCDC122Q5T0U0 273 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 ACAD10Q6JQN1 1059 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 ANKRD54Q6NXT1 300 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 ALKBH5Q6P6C2 394 aaKnown RBP17.68■□□□□ 0.42
CALD1-209ENST00000436461 TMEM184AQ6ZMB5 413 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 SCUBE3Q8IX30 993 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 HDAC7Q8WUI4 952 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 KCTD13Q8WZ19 329 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 PSMG2Q969U7 264 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 HSFY1Q96LI6 401 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 CORO1BQ9BR76 489 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 KCNF1Q9H3M0 494 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 SYNCQ9H7C4 482 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 SFXN1Q9H9B4 322 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 PNPLA8Q9NP80 782 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 CHORDC1Q9UHD1 332 aaPredicted RBP17.68■□□□□ 0.42
CALD1-209ENST00000436461 DPP7Q9UHL4 492 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 NENFQ9UMX5 172 aa17.68■□□□□ 0.42
CALD1-209ENST00000436461 PAPSS1O43252 624 aaPredicted RBP17.67■□□□□ 0.42
CALD1-209ENST00000436461 ATMINO43313 823 aaPredicted RBP17.67■□□□□ 0.42
CALD1-209ENST00000436461 FTLP02792 175 aaPredicted RBP17.67■□□□□ 0.42
CALD1-209ENST00000436461 PTP4A2Q12974 167 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 TAF12Q16514 161 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 FAM183BPQ6ZVS7 135 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 SIX6OS1Q8N1H7 587 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 STK32AQ8WU08 396 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 ZNF512Q96ME7 567 aaPredicted RBP17.67■□□□□ 0.42
CALD1-209ENST00000436461 NOX5Q96PH1 765 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 PACSIN1Q9BY11 444 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 PRKD2Q9BZL6 878 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 UBXN6Q9BZV1 441 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 ZDHHC7Q9NXF8 308 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 DNMT3BQ9UBC3 853 aaKnown RBP17.67■□□□□ 0.42
CALD1-209ENST00000436461 TFR2Q9UP52 801 aa17.67■□□□□ 0.42
CALD1-209ENST00000436461 UNC80Q8N2C7 3258 aa17.66■□□□□ 0.42
CALD1-209ENST00000436461 CSH1P0DML2 217 aa17.66■□□□□ 0.42
CALD1-209ENST00000436461 CSH2P0DML3 217 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms