RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 POF1BQ8WVV4 589 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 C8orf48Q96LL4 319 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 AFF4Q9UHB7 1163 aaKnown RBP24.22■■□□□ 1.47
CPSF4-204ENST00000436336 MSRAQ9UJ68 235 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 MTUS1Q9ULD2 1270 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 SIGLEC16A6NMB1 481 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 GOLGA8SH3BPF8 625 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 PAPSS1O43252 624 aaPredicted RBP24.21■■□□□ 1.47
CPSF4-204ENST00000436336 ABLIM3O94929 683 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 VNN2O95498 520 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 TNNT1P13805 278 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 NDUFV1P49821 464 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 ADIGQ0VDE8 80 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 SPRED2Q7Z698 418 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 SCUBE3Q8IX30 993 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 TDHQ8IZJ6 230 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 SLC35F6Q8N357 371 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 IRAK3Q9Y616 596 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 ZNF638Q14966 1978 aaKnown RBP24.21■■□□□ 1.47
CPSF4-204ENST00000436336 SCNN1AP37088 669 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 SLC6A3Q01959 620 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 FAM102AQ5T9C2 384 aaPredicted RBP24.21■■□□□ 1.47
CPSF4-204ENST00000436336 OLFML1Q6UWY5 402 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 SCN4BQ8IWT1 228 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 SIX6OS1Q8N1H7 587 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 TCF25Q9BQ70 676 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 TLR9Q9NR96 1032 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 HSFX1Q9UBD0 423 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 ANAPC7Q9UJX3 599 aa24.21■■□□□ 1.47
CPSF4-204ENST00000436336 PLXNA3P51805 1871 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 GRID2IPA4D2P6 1211 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 PALMO75781 387 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 CXCL14O95715 111 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 HAPLN1P10915 354 aaPredicted RBP24.2■■□□□ 1.46
CPSF4-204ENST00000436336 KRT3P12035 628 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 TKTL1P51854 596 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 ERVFC1P60507 584 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 ADCY1Q08828 1119 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 DCUN1D2Q6PH85 259 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 ENTPD7Q9NQZ7 604 aa24.2■■□□□ 1.46
CPSF4-204ENST00000436336 METTL5Q9NRN9 209 aaKnown RBP24.2■■□□□ 1.46
CPSF4-204ENST00000436336 MTCL1Q9Y4B5 1905 aaKnown RBP24.19■■□□□ 1.46
CPSF4-204ENST00000436336 TEX28O15482 410 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 FBXO21O94952 628 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 ATF2P15336 505 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 CA8P35219 290 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 DUSP4Q13115 394 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 SMC1AQ14683 1233 aaKnown RBP24.19■■□□□ 1.46
CPSF4-204ENST00000436336 MGAT5BQ3V5L5 792 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 SYT10Q6XYQ8 523 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 GPRIN1Q7Z2K8 1008 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 SYCE1Q8N0S2 351 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 LRRC57Q8N9N7 239 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 MCEEQ96PE7 176 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 CRISPLD1Q9H336 500 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 CNGB3Q9NQW8 809 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 LCMT1Q9UIC8 334 aa24.19■■□□□ 1.46
CPSF4-204ENST00000436336 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 TMEM191CA6NGB0 347 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 BUB1BO60566 1050 aaPredicted RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 GJB6O95452 261 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 DNAJB1P25685 340 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 RPL7AP62424 266 aaKnown RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 C11orf63Q6NUN7 778 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 TTC9BQ8N6N2 239 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 WDR24Q96S15 920 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 NKX2-4Q9H2Z4 354 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 DNAI1Q9UI46 699 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 MAFFQ9ULX9 164 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 SLC27A5Q9Y2P5 690 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 TNRC18O15417 2968 aaPredicted RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 H3BNC9 293 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 MYO1FO00160 1098 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 TNFRSF10BO14763 440 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 CNPP09543 421 aaKnown RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 TUFMP49411 452 aaKnown RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 RPL10AP62906 217 aaKnown RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 MRPS5P82675 430 aaKnown RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 SLC26A9Q7LBE3 791 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 SLFN11Q7Z7L1 901 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 DAAM2Q86T65 1068 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 SCML4Q8N228 414 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 CLEC4CQ8WTT0 213 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 PIWIL1Q96J94 861 aaKnown RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 SEPT5Q99719 369 aaPredicted RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 EMILIN2Q9BXX0 1053 aa24.18■■□□□ 1.46
CPSF4-204ENST00000436336 NGRNQ9NPE2 291 aaKnown RBP24.18■■□□□ 1.46
CPSF4-204ENST00000436336 ATG2AQ2TAZ0 1938 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 GRM6O15303 877 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 SLC5A3P53794 718 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 GPM6BQ13491 265 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 DDR2Q16832 855 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 EFHC1Q5JVL4 640 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 PPP2R2DQ66LE6 453 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 MRPL43Q8N983 215 aaKnown RBP24.17■■□□□ 1.46
CPSF4-204ENST00000436336 BTBD6Q96KE9 485 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 SPATA17Q96L03 361 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 CEP295NLQ96MC4 621 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 KLHL5Q96PQ7 755 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 ULBP1Q9BZM6 244 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms