RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 CRTAC1Q9NQ79 661 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 TMEM74BQ9NUR3 256 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 INTS13Q9NVM9 706 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 EHD2Q9NZN4 543 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 CFAP97Q9P2B7 532 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 ATXN2Q99700 1313 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 ZNF840PA6NDX5 716 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 SRRM3A6NNA2 597 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 TNNC2P02585 160 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 PTGER3P43115 390 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 SLC7A9P82251 487 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 KDSRQ06136 332 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 BYSLQ13895 437 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 RHBDF2Q6PJF5 856 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 HS2ST1Q7LGA3 356 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 C12orf40Q86WS4 652 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 GPD1LQ8N335 351 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 OR5B17Q8NGF7 314 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 ZCCHC14Q8WYQ9 949 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 PCED1BQ96HM7 432 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 CEP295NLQ96MC4 621 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 MMS19Q96T76 1030 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 TTLL2Q9BWV7 592 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 ARHGEF4Q9NR80 690 aa12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 MBD1Q9UIS9 605 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-207ENST00000435083 PTPRJQ12913 1337 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 SPAARA0A1B0GVQ0 90 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 TCRBV21S2A2A0A5A6 115 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 F8VP50 259 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 TRIM66O15016 1216 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 PRPF6O94906 941 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 ADH1CP00326 375 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 CFIP05156 583 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 MBL2P11226 248 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 ADH5P11766 374 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 WARSP23381 471 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 PPP3CCP48454 512 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 ATXN3P54252 364 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 IFRD2Q12894 506 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 ALCAMQ13740 583 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 HSF5Q4G112 596 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 MDH1BQ5I0G3 518 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 LYSMD4Q5XG99 296 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 LIMS2Q7Z4I7 341 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 MYCBPAPQ8TBZ2 947 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 FGFBP2Q9BYJ0 223 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 SNX25Q9H3E2 840 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 OLFML3Q9NRN5 406 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 PANK4Q9NVE7 773 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 CLIC4Q9Y696 253 aa12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 TNRC6BQ9UPQ9 1833 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-207ENST00000435083 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 ITPKAP23677 461 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 TXLNAP40222 546 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 EIF2DP41214 584 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 GRIA2P42262 883 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 DPP6P42658 865 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 TNFRSF4P43489 277 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 KIR2DL1P43626 348 aaPredicted RBP12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 NOP14P78316 857 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 SIM1P81133 766 aaPredicted RBP12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 TAF10Q12962 218 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 SURF1Q15526 300 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 DUOXA2Q1HG44 320 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 MAP7D1Q3KQU3 841 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 SLC23A3Q6PIS1 610 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 DEFB119Q8N690 84 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 KIAA1958Q8N8K9 716 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 C8orf48Q96LL4 319 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 CLIC6Q96NY7 704 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 GTPBP2Q9BX10 602 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 PANK2Q9BZ23 570 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 FSCN3Q9NQT6 498 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 SLC6A14Q9UN76 642 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 MYOFQ9NZM1 2061 aa12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 ASCC3Q8N3C0 2202 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-207ENST00000435083 CEP295Q9C0D2 2601 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 ADAMTS9Q9P2N4 1935 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 ADAM23O75077 832 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 CD2BP2O95400 341 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 OLFM2O95897 454 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 OAS1P00973 400 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 GNL1P36915 607 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 LY6G5CQ5SRR4 150 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 DDX42Q86XP3 938 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 HDDC3Q8N4P3 179 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 NAT16Q8N8M0 369 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 OR6B3Q8NGW1 331 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 SLITRK1Q96PX8 696 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 MRPL45Q9BRJ2 306 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 TBC1D14Q9P2M4 693 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 FBXO2Q9UK22 296 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 PILRBQ9UKJ0 227 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 KLK13Q9UKR3 277 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms