RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
CD44-210ENST00000434472 CDCA5Q96FF9 252 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 CLMNQ96JQ2 1002 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 CYTH2Q99418 400 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 TBCBQ99426 244 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 CALN1Q9BXU9 219 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 GBA2Q9HCG7 927 aaPredicted RBP10.9□□□□□ -0.66
CD44-210ENST00000434472 PDGFCQ9NRA1 345 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 TXLNGQ9NUQ3 528 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 PAK5Q9P286 719 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 PHTF1Q9UMS5 762 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 CLUHO75153 1309 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 IQANK1A0A1B0GTG1 560 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 ZNF487B1APH4 448 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 TM9SF1O15321 606 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 CHADO15335 359 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 EDF1O60869 148 aaKnown RBP10.89□□□□□ -0.67
CD44-210ENST00000434472 CAPN15O75808 1086 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 TOMM70O94826 608 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 ATP6V1G2O95670 118 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 GSTA2P09210 222 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 IQCF3P0C7M6 154 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 ALADP13716 330 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 PDGFRAP16234 1089 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 ARF4P18085 180 aaPredicted RBP10.89□□□□□ -0.67
CD44-210ENST00000434472 GDF10P55107 478 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 CDH6P55285 790 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 CDC42EP1Q00587 391 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 KRT81Q14533 505 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 BBS9Q3SYG4 887 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 SPDYAQ5MJ70 313 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 FNBP1LQ5T0N5 605 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 ANKRD22Q5VYY1 191 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 CGB2Q6NT52 195 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 MTHFD1LQ6UB35 978 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 C3orf62Q6ZUJ4 267 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 CCDC91Q7Z6B0 441 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 ZNF467Q7Z7K2 595 aaPredicted RBP10.89□□□□□ -0.67
CD44-210ENST00000434472 TBC1D1Q86TI0 1168 aaPredicted RBP10.89□□□□□ -0.67
CD44-210ENST00000434472 RPAINQ86UA6 219 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 ZDHHC17Q8IUH5 632 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 NLGN2Q8NFZ4 835 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 UBA3Q8TBC4 463 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 SPATA18Q8TC71 538 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 ZNF398Q8TD17 642 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 NLRP7Q8WX94 980 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 KLHL29Q96CT2 875 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 OPTNQ96CV9 577 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 RNF157Q96PX1 679 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 R3HDMLQ9H3Y0 253 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 PLEKHA5Q9HAU0 1116 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 HMGXB4Q9UGU5 601 aa10.89□□□□□ -0.67
CD44-210ENST00000434472 POLR2AP24928 1970 aaKnown RBP10.89□□□□□ -0.67
CD44-210ENST00000434472 GOLGA8MH3BSY2 632 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 H7C0C1 242 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 TSPAN1O60635 241 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 CD48P09326 243 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 EZRP15311 586 aaKnown RBP10.88□□□□□ -0.67
CD44-210ENST00000434472 ATP5OP48047 213 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 BASP1P80723 227 aaKnown RBP10.88□□□□□ -0.67
CD44-210ENST00000434472 PDE4CQ08493 712 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 ADCY1Q08828 1119 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 SF3A3Q12874 501 aaKnown RBP eCLIP10.88□□□□□ -0.67
CD44-210ENST00000434472 ORC1Q13415 861 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 SNAPC2Q13487 334 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 R3HDM1Q15032 1099 aaKnown RBP10.88□□□□□ -0.67
CD44-210ENST00000434472 GOLGA7BQ2TAP0 167 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 ZNF792Q3KQV3 632 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 HP1BP3Q5SSJ5 553 aaPredicted RBP10.88□□□□□ -0.67
CD44-210ENST00000434472 FYB2Q5VWT5 728 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 TAPT1Q6NXT6 567 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 CAPN12Q6ZSI9 719 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 FAM183BPQ6ZVS7 135 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 SESTD1Q86VW0 696 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 C4orf33Q8N1A6 199 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 FAM71DQ8N9W8 422 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 STK32AQ8WU08 396 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 ZC3H15Q8WU90 426 aaKnown RBP10.88□□□□□ -0.67
CD44-210ENST00000434472 APBB2Q92870 758 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 RTP4Q96DX8 246 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 CPB2Q96IY4 423 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 RAB3IPQ96QF0 476 aaPredicted RBP10.88□□□□□ -0.67
CD44-210ENST00000434472 PAFAH2Q99487 392 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 PNPLA8Q9NP80 782 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 SAE1Q9UBE0 346 aaPredicted RBP10.88□□□□□ -0.67
CD44-210ENST00000434472 TSPAN16Q9UKR8 245 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 IKBKGQ9Y6K9 419 aa10.88□□□□□ -0.67
CD44-210ENST00000434472 APOL1O14791 398 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 TMEM63AO94886 807 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 MT-ND3P03897 115 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 TROVE2P10155 538 aaKnown RBP eCLIP10.87□□□□□ -0.67
CD44-210ENST00000434472 CCNB1P14635 433 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 ZFXP17010 805 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 KRT4P19013 534 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 SSTR1P30872 391 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 SDC4P31431 198 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 RPA3P35244 121 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 SCNN1AP37088 669 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 YARSP54577 528 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms