RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SMARCD1Q96GM5 515 aa23.5■■□□□ 1.35
SEMA3B-205ENST00000434030 SLITRK1Q96PX8 696 aa23.5■■□□□ 1.35
SEMA3B-205ENST00000434030 TSG101Q99816 390 aa23.5■■□□□ 1.35
SEMA3B-205ENST00000434030 GTPBP4Q9BZE4 634 aaKnown RBP23.5■■□□□ 1.35
SEMA3B-205ENST00000434030 RNF38Q9H0F5 515 aa23.5■■□□□ 1.35
SEMA3B-205ENST00000434030 CYP3A43Q9HB55 503 aa23.5■■□□□ 1.35
SEMA3B-205ENST00000434030 ARHGAP26Q9UNA1 814 aa23.5■■□□□ 1.35
SEMA3B-205ENST00000434030 PTPRZ1P23471 2315 aaPredicted RBP23.5■■□□□ 1.35
SEMA3B-205ENST00000434030 TNFRSF10BO14763 440 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 AP1G2O75843 785 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 RTN3O95197 1032 aaPredicted RBP23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 ABL1P00519 1130 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 CCDC130P13994 396 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 ZXDBP98169 803 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 FKBP3Q00688 224 aaKnown RBP23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 INCA1Q0VD86 236 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 DGKKQ5KSL6 1271 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 ISM2Q6H9L7 571 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 ZC3H3Q8IXZ2 948 aaKnown RBP23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 C12orf29Q8N999 325 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 NELL1Q92832 810 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 SEMA4DQ92854 862 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 CHFRQ96EP1 664 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 TWNKQ96RR1 684 aa23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 DMAP1Q9NPF5 467 aaPredicted RBP23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 DUS2Q9NX74 493 aaKnown RBP23.49■■□□□ 1.35
SEMA3B-205ENST00000434030 TRIM49BA6NDI0 452 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 GADD45BO75293 160 aaPredicted RBP23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 BEST1O76090 585 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 LMNAP02545 664 aaKnown RBP23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 CCINQ13939 588 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 CCDC150Q8NCX0 1101 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 ZMIZ2Q8NF64 920 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 SCAMP5Q8TAC9 235 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 SLC2A14Q8TDB8 520 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 SMOQ99835 787 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 NIF3L1Q9GZT8 377 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 KRT82Q9NSB4 513 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 FAM49BQ9NUQ9 324 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 IL37Q9NZH6 218 aa23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 CIZ1Q9ULV3 898 aaPredicted RBP23.48■■□□□ 1.35
SEMA3B-205ENST00000434030 STX10O60499 249 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 KINO60870 393 aaKnown RBP23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 OLFM2O95897 454 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 OAS1P00973 400 aaKnown RBP23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 MXI1P50539 228 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 CCR3P51677 355 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 SLC7A9P82251 487 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 SPEM1Q8N4L4 309 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 ZBTB44Q8NCP5 570 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 FBXL13Q8NEE6 735 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 WHAMMQ8TF30 809 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 OVCA2Q8WZ82 227 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 FBXO32Q969P5 355 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 NT5C1AQ9BXI3 368 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 LINC00597Q9H2U6 94 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 ECT2Q9H8V3 914 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 CSNK1G1Q9HCP0 422 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 ZSCAN32Q9NX65 697 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 CHORDC1Q9UHD1 332 aaPredicted RBP23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 MAN1B1Q9UKM7 699 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 PCDHGA2Q9Y5H1 932 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 WNT6Q9Y6F9 365 aa23.47■■□□□ 1.35
SEMA3B-205ENST00000434030 LEFTY2O00292 366 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 TRDMT1O14717 391 aaKnown RBP23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 SLC16A3O15427 465 aaKnown RBP23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 TDGF1P13385 188 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 GJA4P35212 333 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 CXCL12P48061 93 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 IFNAR2P48551 515 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 SLC5A3P53794 718 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 SATB1Q01826 763 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 LRRC63Q05C16 580 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 EML3Q32P44 896 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 TMEM196Q5HYL7 178 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 Q6ZS52 159 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 KIAA1549LQ6ZVL6 1849 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 SYNPOQ8N3V7 929 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 PDZD8Q8NEN9 1154 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 ATRIPQ8WXE1 791 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 ATP2A3Q93084 1043 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 HNRNPABQ99729 332 aaKnown RBP23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 COMMD8Q9NX08 183 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 RAB20Q9NX57 234 aa23.46■■□□□ 1.35
SEMA3B-205ENST00000434030 CILPO75339 1184 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 CD44P16070 742 aaKnown RBP23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 CD58P19256 250 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 TRIM21P19474 475 aaKnown RBP23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 MAP3K7CLP57077 242 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 AMPD2Q01433 879 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 STIM1Q13586 685 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 PPP2R5DQ14738 602 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 TCERG1LQ5VWI1 586 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 CPA6Q8N4T0 437 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 CYFIP2Q96F07 1278 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 DHTKD1Q96HY7 919 aaPredicted RBP23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 FAXDC2Q96IV6 333 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 FAM126AQ9BYI3 521 aaPredicted RBP23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 CPQQ9Y646 472 aa23.45■■□□□ 1.34
SEMA3B-205ENST00000434030 FAM92AA1XBS5 289 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms