RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 P4HA1P13674 534 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 PTPN1P18031 435 aaKnown RBP15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 HOXD13P35453 343 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 RAP1GAPP47736 663 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 SLC7A9P82251 487 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 EHHADHQ08426 723 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 CUL4BQ13620 913 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 KNOP1Q1ED39 458 aaKnown RBP15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 PKN3Q6P5Z2 889 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 KRBA2Q6ZNG9 492 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 B3GALNT2Q8NCR0 500 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 OVCA2Q8WZ82 227 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 ZC3H10Q96K80 434 aaKnown RBP15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 TNIP3Q96KP6 325 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 EXOC1Q9NV70 894 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 EBF1Q9UH73 591 aa15.84■□□□□ 0.13
RPUSD3-208ENST00000433972 KIF26AQ9ULI4 1882 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 ZNF840PA6NDX5 716 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 LEFTY2O00292 366 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 CLIC2O15247 247 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 KIF20AO95235 890 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 CST3P01034 146 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 ZNF806P0C7X5 589 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 PXNP49023 591 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 BIRC3Q13489 604 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 DMC1Q14565 340 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 CCDC142Q17RM4 750 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 PREPLQ4J6C6 727 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 HHIPQ96QV1 700 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 MRPL45Q9BRJ2 306 aaKnown RBP15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 ARRDC1-AS1Q9H2J1 176 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 VRTNQ9H8Y1 702 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 FBRSL1Q9HCM7 1045 aaKnown RBP15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 VPS45Q9NRW7 570 aa15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 NXF1Q9UBU9 619 aaKnown RBP15.83■□□□□ 0.12
RPUSD3-208ENST00000433972 ABL1P00519 1130 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 ADRB1P08588 477 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 YWHAQP27348 245 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 EIF2DP41214 584 aaKnown RBP15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 ZNF699Q32M78 642 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 HSF5Q4G112 596 aaPredicted RBP15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 PPM1JQ5JR12 505 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 SCARA3Q6AZY7 606 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 KBTBD6Q86V97 674 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 GRAMD1CQ8IYS0 662 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 NUP93Q8N1F7 819 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 TSTD1Q8NFU3 115 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 GOLPH3LQ9H4A5 285 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 SLC39A2Q9NP94 309 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 TBC1D14Q9P2M4 693 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 CPQQ9Y646 472 aa15.82■□□□□ 0.12
RPUSD3-208ENST00000433972 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 ALDH1A2O94788 518 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 OLFM2O95897 454 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 ADH1CP00326 375 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 OAS1P00973 400 aaKnown RBP15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 MYL6P60660 151 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 USP46P62068 366 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 MRPS21P82921 87 aaKnown RBP15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 TAF10Q12962 218 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 USP39Q53GS9 565 aaKnown RBP15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 ZNF667Q5HYK9 610 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 TMEM174Q8WUU8 243 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 OTUB2Q96DC9 234 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 TIGD1Q96MW7 591 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 DNAI2Q9GZS0 605 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 COMMD8Q9NX08 183 aa15.81■□□□□ 0.12
RPUSD3-208ENST00000433972 SMC2O95347 1197 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 RPN1P04843 607 aaKnown RBP15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 MBL2P11226 248 aaPredicted RBP15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 CASP1P29466 404 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 MPLP40238 635 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 DGKEP52429 567 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 PLK5Q496M5 336 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 PLA2G2CQ5R387 149 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 NUDT18Q6ZVK8 323 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 FILIP1Q7Z7B0 1213 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 SLC9A9Q8IVB4 645 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 FMR1NBQ8N0W7 255 aaPredicted RBP15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 USP33Q8TEY7 942 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 FBXO32Q969P5 355 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 SMARCD1Q96GM5 515 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 MED10Q9BTT4 135 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 GTPBP4Q9BZE4 634 aaKnown RBP15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 ZNF518BQ9C0D4 1074 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 XYLT2Q9H1B5 865 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 LINC00597Q9H2U6 94 aa15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 DMAP1Q9NPF5 467 aaPredicted RBP15.8■□□□□ 0.12
RPUSD3-208ENST00000433972 E2F8A0AVK6 867 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 GDF9O60383 454 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 APODP05090 189 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 GBP1P32455 592 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 TUBP50607 506 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 UBE2HP62256 183 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 CLDN10P78369 228 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 IFRD2Q12894 506 aaPredicted RBP15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 NCOA4Q13772 614 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 KMT5BQ4FZB7 885 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 HECTD3Q5T447 861 aa15.79■□□□□ 0.12
RPUSD3-208ENST00000433972 BTBD8Q5XKL5 378 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms