RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 CCT8L1PA6NM43 557 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 RASA4BC9J798 803 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 NDC80O14777 642 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 RASA4O43374 803 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 SNX3O60493 162 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 ADCY1Q08828 1119 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 DPYSL3Q14195 570 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 ACOT1Q86TX2 421 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 C18orf25Q96B23 403 aaPredicted RBP17.79■□□□□ 0.44
CTSD-204ENST00000433655 PHACTR1Q9C0D0 580 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 FAM49AQ9H0Q0 323 aaPredicted RBP17.79■□□□□ 0.44
CTSD-204ENST00000433655 KDM4CQ9H3R0 1056 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 ACTR5Q9H9F9 607 aaPredicted RBP17.79■□□□□ 0.44
CTSD-204ENST00000433655 VPS37BQ9H9H4 285 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 FGFR1OP2Q9NVK5 253 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 ZMYND8Q9ULU4 1186 aaPredicted RBP17.79■□□□□ 0.44
CTSD-204ENST00000433655 SNX9Q9Y5X1 595 aa17.79■□□□□ 0.44
CTSD-204ENST00000433655 GOLGA6L7A0A1B0GV03 622 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 E7ESA3 106 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 DPYSL4O14531 572 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 CDH6P55285 790 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 HIC1Q14526 733 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 NOMO1Q15155 1222 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 CDO1Q16878 200 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 SLC27A1Q6PCB7 646 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 FAM71DQ8N9W8 422 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 RSAD2Q8WXG1 361 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 PTPN18Q99952 460 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 LPIN3Q9BQK8 851 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 SLC4A5Q9BY07 1137 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 NSRP1Q9H0G5 558 aaKnown RBP17.78■□□□□ 0.44
CTSD-204ENST00000433655 TMEM51Q9NW97 253 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 GINS2Q9Y248 185 aa17.78■□□□□ 0.44
CTSD-204ENST00000433655 POC1B-GALNT4F8VUJ3 575 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 HCRTO43612 131 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 RBP3P10745 1247 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 GHRP10912 638 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 IL4RP24394 825 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 WDR4P57081 412 aaKnown RBP17.77■□□□□ 0.44
CTSD-204ENST00000433655 STILQ15468 1287 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 PKN2Q16513 984 aaKnown RBP17.77■□□□□ 0.44
CTSD-204ENST00000433655 IQSEC1Q6DN90 963 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 ALKAL1Q6UXT8 129 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 TAB3Q8N5C8 712 aaPredicted RBP17.77■□□□□ 0.44
CTSD-204ENST00000433655 SPATA18Q8TC71 538 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 SLC35F5Q8WV83 523 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 P3H4Q92791 437 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 OSMRQ99650 979 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 KIF9Q9HAQ2 790 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 FAM49BQ9NUQ9 324 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 RNF19AQ9NV58 838 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 SAMD15Q9P1V8 674 aa17.77■□□□□ 0.44
CTSD-204ENST00000433655 SMIM10L2AP0DMW4 78 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 SMIM10L2BP0DMW5 78 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 SCTRP47872 440 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 EFHC2Q5JST6 749 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 GLRA4Q5JXX5 417 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 CGB2Q6NT52 195 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 CATSPER4Q7RTX7 472 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 PLEKHH3Q7Z736 793 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 GCOM2Q9BZD3 368 aaPredicted RBP17.77■□□□□ 0.43
CTSD-204ENST00000433655 DPEP3Q9H4B8 488 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 NXF3Q9H4D5 531 aaKnown RBP17.77■□□□□ 0.43
CTSD-204ENST00000433655 RABGEF1Q9UJ41 708 aa17.77■□□□□ 0.43
CTSD-204ENST00000433655 RRN3P2A6NIE6 340 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 MCF2LO15068 1137 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 PAPSS1O43252 624 aaPredicted RBP17.76■□□□□ 0.43
CTSD-204ENST00000433655 F2P00734 622 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 SSTR1P30872 391 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 EFTUD2Q15029 972 aaKnown RBP eCLIP17.76■□□□□ 0.437e-7■■■■■ 31.5
CTSD-204ENST00000433655 RASA2Q15283 850 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 FAM110CQ1W6H9 321 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 TMEM110Q86TL2 294 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 TAX1BP1Q86VP1 789 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 ANKS4BQ8N8V4 417 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 DENND1AQ8TEH3 1009 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 MAGEB18Q96M61 343 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 RNF157Q96PX1 679 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 GPATCH2LQ9NWQ4 482 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 CNTN3Q9P232 1028 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 MBLAC1A4D2B0 266 aaPredicted RBP17.76■□□□□ 0.43
CTSD-204ENST00000433655 IQCA1LA6NCM1 817 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 FAM47DPA6NHR8 397 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 A6NJR5 290 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 PRPSAP2O60256 369 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 FOXN2P32314 431 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 ARL4CP56559 192 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 ATP11AP98196 1134 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 SLC6A3Q01959 620 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 NR1H3Q13133 447 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 SOWAHAQ2M3V2 549 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 ZC3H12AQ5D1E8 599 aaKnown RBP17.76■□□□□ 0.43
CTSD-204ENST00000433655 PRAMEF19Q5SWL8 479 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 FAM182AQ5T1J6 154 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 NUGGCQ68CJ6 796 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 ARHGEF18Q6ZSZ5 1173 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 PNMA8AQ86V59 439 aaPredicted RBP17.76■□□□□ 0.43
CTSD-204ENST00000433655 PQLC3Q8N755 202 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 LRRC52Q8N7C0 313 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 TGS1Q96RS0 853 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms