RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 CCDC50Q8IVM0 306 aa11.1□□□□□ -0.63
NEFM-202ENST00000433454 RBM41Q96IZ5 413 aaKnown RBP11.1□□□□□ -0.63
NEFM-202ENST00000433454 TMEM209Q96SK2 561 aa11.1□□□□□ -0.63
NEFM-202ENST00000433454 KRT12Q99456 494 aa11.1□□□□□ -0.63
NEFM-202ENST00000433454 SMOQ99835 787 aa11.1□□□□□ -0.63
NEFM-202ENST00000433454 DMAP1Q9NPF5 467 aaPredicted RBP11.1□□□□□ -0.63
NEFM-202ENST00000433454 ARGLU1Q9NWB6 273 aaPredicted RBP11.1□□□□□ -0.63
NEFM-202ENST00000433454 DDX56Q9NY93 547 aaKnown RBP11.1□□□□□ -0.63
NEFM-202ENST00000433454 VWA8A3KMH1 1905 aa11.1□□□□□ -0.63
NEFM-202ENST00000433454 PCK1P35558 622 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 CETN2P41208 172 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 SLC25A11Q02978 314 aaKnown RBP11.09□□□□□ -0.63
NEFM-202ENST00000433454 PPP2R5EQ16537 467 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 ODF2Q5BJF6 829 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 FUT10Q6P4F1 479 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 ADAT2Q7Z6V5 191 aaKnown RBP11.09□□□□□ -0.63
NEFM-202ENST00000433454 CLEC4CQ8WTT0 213 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 PNKPQ96T60 521 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 LRRC1Q9BTT6 524 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 CSNK1G1Q9HCP0 422 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 MTUS1Q9ULD2 1270 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 PTPRDP23468 1912 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 NLRC5Q86WI3 1866 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 HSF2BPO75031 334 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 FBXO21O94952 628 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 KRT1P04264 644 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 H2AFXP16104 143 aaPredicted RBP11.09□□□□□ -0.63
NEFM-202ENST00000433454 FGFR3P22607 806 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 BDNFP23560 247 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 MCM3P25205 808 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 ALDH7A1P49419 539 aaKnown RBP11.09□□□□□ -0.63
NEFM-202ENST00000433454 MRPS5P82675 430 aaKnown RBP11.09□□□□□ -0.63
NEFM-202ENST00000433454 EFHC1Q5JVL4 640 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 TRNP1Q6NT89 227 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 FBXO38Q6PIJ6 1188 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 CEP57Q86XR8 500 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 SPATA2LQ8IUW3 424 aaPredicted RBP11.09□□□□□ -0.63
NEFM-202ENST00000433454 KLHL7Q8IXQ5 586 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 DCP1BQ8IZD4 617 aaKnown RBP11.09□□□□□ -0.63
NEFM-202ENST00000433454 RUBCNQ92622 972 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 KHSRPQ92945 711 aaKnown RBP eCLIP11.09□□□□□ -0.63
NEFM-202ENST00000433454 TOP1MTQ969P6 601 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 CFAP57Q96MR6 1250 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 KCNK16Q96T55 309 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 RHOBTB2Q9BYZ6 727 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 GPR62Q9BZJ7 368 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 MCOLN1Q9GZU1 580 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 ZCWPW1Q9H0M4 648 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 TMEM30AQ9NV96 361 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 TMLHEQ9NVH6 421 aa11.09□□□□□ -0.63
NEFM-202ENST00000433454 SART1O43290 800 aaKnown RBP11.08□□□□□ -0.64
NEFM-202ENST00000433454 MIPP30301 263 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 PBX3P40426 434 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 TKTL1P51854 596 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 CACNA2D1P54289 1103 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 ADCY1Q08828 1119 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 CDO1Q16878 200 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 CCDC14Q49A88 953 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 RCOR2Q8IZ40 523 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 ARFGAP1Q8N6T3 406 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 ZMIZ2Q8NF64 920 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 MAIP1Q8WWC4 291 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 FAM149B1Q96BN6 582 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 NCAPGQ9BPX3 1015 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 DDX47Q9H0S4 455 aaKnown RBP11.08□□□□□ -0.64
NEFM-202ENST00000433454 SLITRK6Q9H5Y7 841 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 ZWILCHQ9H900 591 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 PNPLA8Q9NP80 782 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 KLHL11Q9NVR0 708 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 STIM2Q9P246 746 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 RAB21Q9UL25 225 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 USP18Q9UMW8 372 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 COL4A6Q14031 1691 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 OR6C75A6NL08 312 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 NT5C1B-RDH14C9J2C7 533 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 FSCN2O14926 492 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 BAIAP3O94812 1187 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 PTPN9P43378 593 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 WDR5P61964 334 aaKnown RBP11.08□□□□□ -0.64
NEFM-202ENST00000433454 ATP11AP98196 1134 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 NFE2Q16621 373 aaPredicted RBP11.08□□□□□ -0.64
NEFM-202ENST00000433454 C15orf59Q2T9L4 293 aaPredicted RBP11.08□□□□□ -0.64
NEFM-202ENST00000433454 CTXN3Q4LDR2 81 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 SLC39A12Q504Y0 691 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 RAB41Q5JT25 222 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 WDR93Q6P2C0 686 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 UBE2Q1Q7Z7E8 422 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 TMEM173Q86WV6 379 aaPredicted RBP11.08□□□□□ -0.64
NEFM-202ENST00000433454 NGRNQ9NPE2 291 aaKnown RBP11.08□□□□□ -0.64
NEFM-202ENST00000433454 CNGB3Q9NQW8 809 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 NR2E1Q9Y466 385 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 PATJQ8NI35 1801 aa11.08□□□□□ -0.64
NEFM-202ENST00000433454 LRRD1A4D1F6 860 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 PRPSAP2O60256 369 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 GLI1P08151 1106 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 RALAP11233 206 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 IL1R2P27930 398 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms