RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 PDZD8Q8NEN9 1154 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 ZC3H10Q96K80 434 aaKnown RBP17.22■□□□□ 0.35
ACTB-205ENST00000432588 TNIP3Q96KP6 325 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 ZNF518BQ9C0D4 1074 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 VRTNQ9H8Y1 702 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 POLR3BQ9NW08 1133 aaPredicted RBP17.22■□□□□ 0.35
ACTB-205ENST00000432588 EBF1Q9UH73 591 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 NME7Q9Y5B8 376 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 CPQQ9Y646 472 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 GREB1Q4ZG55 1949 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 RALGAPA1Q6GYQ0 2036 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 CLDN5O00501 218 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 GDF9O60383 454 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 OAS1P00973 400 aaKnown RBP17.21■□□□□ 0.35
ACTB-205ENST00000432588 SLFN14P0C7P3 912 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 ZNF806P0C7X5 589 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 P4HA1P13674 534 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 YWHAQP27348 245 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 ZXDBP98169 803 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 ZNF667Q5HYK9 610 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 PPM1JQ5JR12 505 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 FILIP1Q7Z7B0 1213 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 TSTD1Q8NFU3 115 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 PARD3BQ8TEW8 1205 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 OVCA2Q8WZ82 227 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 EZH1Q92800 747 aaPredicted RBP17.21■□□□□ 0.35
ACTB-205ENST00000432588 MED10Q9BTT4 135 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 B3GNT5Q9BYG0 378 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 RNF38Q9H0F5 515 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 GZF1Q9H116 711 aaPredicted RBP17.21■□□□□ 0.35
ACTB-205ENST00000432588 SMPD4Q9NXE4 827 aa17.21■□□□□ 0.35
ACTB-205ENST00000432588 PTPRDP23468 1912 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 RHOBTB1O94844 696 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 OLFM2O95897 454 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 MBL2P11226 248 aaPredicted RBP17.2■□□□□ 0.34
ACTB-205ENST00000432588 OPRD1P41143 372 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 CASP4P49662 377 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 LIMK1P53667 647 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 CACNA2D1P54289 1103 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 CLDN10P78369 228 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 IFRD2Q12894 506 aaPredicted RBP17.2■□□□□ 0.34
ACTB-205ENST00000432588 NCOA4Q13772 614 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 SF3A2Q15428 464 aaKnown RBP17.2■□□□□ 0.34
ACTB-205ENST00000432588 PLK5Q496M5 336 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 GRAMD1CQ8IYS0 662 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 ADGRG2Q8IZP9 1017 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 USP33Q8TEY7 942 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 FBXO32Q969P5 355 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 TMEM30AQ9NV96 361 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 CFAP97Q9P2B7 532 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 SERTAD1Q9UHV2 236 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 ATG2BQ96BY7 2078 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 SDK1Q7Z5N4 2213 aa17.2■□□□□ 0.34
ACTB-205ENST00000432588 TPRP12270 2363 aaKnown RBP17.2■□□□□ 0.34
ACTB-205ENST00000432588 HELZP42694 1942 aaKnown RBP17.19■□□□□ 0.34
ACTB-205ENST00000432588 EPG5Q9HCE0 2579 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 SPAG17Q6Q759 2223 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 ACACBO00763 2458 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 LRRIQ3A6PVS8 624 aaPredicted RBP17.19■□□□□ 0.34
ACTB-205ENST00000432588 ADH1CP00326 375 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 CYP17A1P05093 508 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 ADRB1P08588 477 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 MPLP40238 635 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 DGKEP52429 567 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 CDH8P55286 799 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 SEC13P55735 322 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 CCDC6Q16204 474 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 C2orf27AQ580R0 203 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 FAM35AQ86V20 835 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 C11orf74Q86VG3 221 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 SLC9A9Q8IVB4 645 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 TMEM174Q8WUU8 243 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 SMARCD1Q96GM5 515 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 SMYD3Q9H7B4 428 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 DMAP1Q9NPF5 467 aaPredicted RBP17.19■□□□□ 0.34
ACTB-205ENST00000432588 VPS45Q9NRW7 570 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 TBC1D14Q9P2M4 693 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 USP25Q9UHP3 1055 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 RCOR1Q9UKL0 485 aa17.19■□□□□ 0.34
ACTB-205ENST00000432588 E2F8A0AVK6 867 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 K7EQS6 105 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 ACTN4O43707 911 aaKnown RBP17.18■□□□□ 0.34
ACTB-205ENST00000432588 TRIM21P19474 475 aaKnown RBP17.18■□□□□ 0.34
ACTB-205ENST00000432588 GBP1P32455 592 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 EIF2DP41214 584 aaKnown RBP17.18■□□□□ 0.34
ACTB-205ENST00000432588 MRPS21P82921 87 aaKnown RBP17.18■□□□□ 0.34
ACTB-205ENST00000432588 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
ACTB-205ENST00000432588 STK4Q13043 487 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 DHCR24Q15392 516 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 SGSM1Q2NKQ1 1148 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 USP39Q53GS9 565 aaKnown RBP17.18■□□□□ 0.34
ACTB-205ENST00000432588 PLA2G2CQ5R387 149 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 HECTD3Q5T447 861 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 SCARA5Q6ZMJ2 495 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 PLEKHO2Q8TD55 490 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 PAGE5Q96GU1 130 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 KCNK16Q96T55 309 aa17.18■□□□□ 0.34
ACTB-205ENST00000432588 PNKPQ96T60 521 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms