RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 NAXEQ8NCW5 288 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 FLCNQ8NFG4 579 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 TGFBRAP1Q8WUH2 860 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 PTPRN2Q92932 1015 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 VMP1Q96GC9 406 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 PPM1MQ96MI6 270 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 GORASP1Q9BQQ3 440 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 YIPF4Q9BSR8 244 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 ANO3Q9BYT9 981 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 KIAA1683Q9H0B3 1180 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 R3HDMLQ9H3Y0 253 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 PSTPIP2Q9H939 334 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 FBRSQ9HAH7 460 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 DMAP1Q9NPF5 467 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-202ENST00000432306 NMRK1Q9NWW6 199 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 STX18Q9P2W9 335 aaKnown RBP8.45□□□□□ -1.06
VTI1A-202ENST00000432306 SCOCQ9UIL1 159 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 NOCTQ9UK39 431 aaKnown RBP8.45□□□□□ -1.06
VTI1A-202ENST00000432306 PHTF1Q9UMS5 762 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
VTI1A-202ENST00000432306 C2CD2Q9Y426 696 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 TCRBV7S2A1N4TA0A589 114 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 A8MXQ7 604 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 F8W8V4 182 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 NDC80O14777 642 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 TYROBPO43914 113 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 CCDC22O60826 627 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 TJP3O95049 919 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 TGDSO95455 350 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 ACSL3O95573 720 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 PENKP01210 267 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-202ENST00000432306 FTLP02792 175 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-202ENST00000432306 CCDC159P0C7I6 412 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 EN2P19622 333 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-202ENST00000432306 CHKAP35790 457 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 ITKQ08881 620 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 BFSP1Q12934 665 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 KLF1Q13351 362 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-202ENST00000432306 ZC3H12BQ5HYM0 836 aaKnown RBP8.44□□□□□ -1.06
VTI1A-202ENST00000432306 AADACL2Q6P093 401 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 TMEM154Q6P9G4 183 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 OTUD6AQ7L8S5 288 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 FAM71AQ8IYT1 594 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 ADGRF4Q8IZF3 695 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.44□□□□□ -1.06
VTI1A-202ENST00000432306 LRRC8CQ8TDW0 803 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 USP33Q8TEY7 942 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 FAM81BQ96LP2 452 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 TTC25Q96NG3 672 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 HAPLN3Q96S86 360 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 KCNK9Q9NPC2 374 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF212Q9UDV6 495 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 GPSM3Q9Y4H4 160 aa8.44□□□□□ -1.06
VTI1A-202ENST00000432306 FOXN3O00409 490 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 TOR1BO14657 336 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 THAP12O43422 761 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 EXOC3O60645 756 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 TBCAO75347 108 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 GCNT3O95395 438 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 CYP3A4P08684 503 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 CHRNB2P17787 502 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 TARSP26639 723 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 GCAP28676 217 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ADSSP30520 456 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SLC1A1P43005 524 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 COPAP53621 1224 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ITGA8P53708 1063 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SNRPFP62306 86 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 PSMC6P62333 389 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 MYL7Q01449 175 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SLC34A1Q06495 639 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 AP1B1Q10567 949 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 TMED1Q13445 227 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 CUL3Q13618 768 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ARHGEF6Q15052 776 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 CCNG2Q16589 344 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 KYNUQ16719 465 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 UBE2SQ16763 222 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 TBC1D25Q3MII6 688 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 EPC2Q52LR7 807 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 PRAMEF18Q5VWM3 479 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 RINT1Q6NUQ1 792 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 DRICH1Q6PGQ1 229 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 STXBP4Q6ZWJ1 553 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 C1orf186Q6ZWK4 172 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SH3BP5LQ7L8J4 393 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF720Q7Z2F6 126 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ADAT2Q7Z6V5 191 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 LONP2Q86WA8 852 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 APOBEC3FQ8IUX4 373 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 MGARPQ8TDB4 240 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SH3KBP1Q96B97 665 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 PTCD3Q96EY7 689 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 CFAP57Q96MR6 1250 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 MIPEPQ99797 713 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 DCLK3Q9C098 648 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ABCG4Q9H172 646 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 VAT1LQ9HCJ6 419 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 TUFT1Q9NNX1 390 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms