RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 INTS2Q9H0H0 1204 aaKnown RBP4.84□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF334Q9HCZ1 680 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-202ENST00000431736 FAM49BQ9NUQ9 324 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 GTF3C4Q9UKN8 822 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 ITIH6Q6UXX5 1313 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 TMEM8BA6NDV4 472 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 HTR1BP28222 390 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CLK2P49760 499 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 KIAA1211LQ6NV74 962 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 MSLNLQ96KJ4 702 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CEP295NLQ96MC4 621 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 NIF3L1Q9GZT8 377 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ERVW-1Q9UQF0 538 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF236Q9UL36 1845 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 PVALEFA0A1B0GWK0 134 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 MTMR11A4FU01 709 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 PDE2AO00408 941 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 LZTS3O60299 673 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 TLR5O60602 858 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 HEXIM1O94992 359 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 HAPLN1P10915 354 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 NTSR1P30989 418 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 VAMP7P51809 220 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 FAM78AQ5JUQ0 283 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 TANGO2Q6ICL3 276 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 RETSATQ6NUM9 610 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ARMC6Q6NXE6 501 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 RTN4RL1Q86UN2 441 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 SMG8Q8ND04 991 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ST13P5Q8NFI4 369 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ITFG1Q8TB96 612 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 LGMNQ99538 433 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 RNF39Q9H2S5 420 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CHRDQ9H2X0 955 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CCDC86Q9H6F5 360 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 PDE11AQ9HCR9 933 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 MARCH2Q9P0N8 246 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CLEC1BQ9P126 229 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 WNT6Q9Y6F9 365 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 DHX15O43143 795 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ZSCAN22P10073 491 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 LCP1P13796 627 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 FGFR3P22607 806 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 NOS2P35228 1153 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 RPS9P46781 194 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 MAP3K7CLP57077 242 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ITKQ08881 620 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 KNOP1Q1ED39 458 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 SPATA1Q5VX52 437 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF776Q68DI1 518 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ESRP1Q6NXG1 681 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 EFCAB3Q8N7B9 438 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ZCCHC14Q8WYQ9 949 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 INTS4Q96HW7 963 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CCSER1Q9C0I3 900 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 INTS13Q9NVM9 706 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CNTN3Q9P232 1028 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 HSFX1Q9UBD0 423 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 VAV3Q9UKW4 847 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 PCDHA5Q9Y5H7 936 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 BAZ2BQ9UIF8 2168 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 C19orf67A6NJJ6 358 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 MICAL2O94851 1124 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 KAT7O95251 611 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 POU2F2P09086 479 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CTHP32929 405 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CCT8P50990 548 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 MCL1Q07820 350 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 RWDD4Q6NW29 188 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF598Q86UK7 904 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 UNC93AQ86WB7 457 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 IFNLR1Q8IU57 520 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 LNX1Q8TBB1 728 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 PSMG2Q969U7 264 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 VPS50Q96JG6 964 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 NUP58Q9BVL2 599 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 RUBCNLQ9H714 662 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 DNMT3BQ9UBC3 853 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 TUBGCP4Q9UGJ1 667 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CDK5RAP2Q96SN8 1893 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 EP400Q96L91 3159 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 A0A1B0GTW7 788 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 C4orf47A7E2U8 309 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 RARGP13631 454 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 KELP23276 732 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 RNASE9P60153 205 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 TAF10Q12962 218 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CTC1Q2NKJ3 1217 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF394Q53GI3 561 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 PSAPL1Q6NUJ1 521 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 TYW1BQ6NUM6 668 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 CYB5D1Q6P9G0 228 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 SYT12Q8IV01 421 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 MAP4K3Q8IVH8 894 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 TRIM48Q8IWZ4 208 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 HS6ST3Q8IZP7 471 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 FBXL16Q8N461 479 aa4.83□□□□□ -1.64
UBE4A-202ENST00000431736 TXNDC5Q8NBS9 432 aaKnown RBP4.83□□□□□ -1.64
UBE4A-202ENST00000431736 KIAA1143Q96AT1 154 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms