RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 TNFRSF10BO14763 440 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 RETP07949 1114 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 OPRD1P41143 372 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 MESP2Q0VG99 397 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 PSMD2Q13200 908 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 ORC1Q13415 861 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 ZACNQ401N2 412 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 SPOPLQ6IQ16 392 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 FAM160A2Q8N612 972 aaPredicted RBP17.31■□□□□ 0.36
PTPRA-206ENST00000430705 ZMIZ2Q8NF64 920 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 CD101Q93033 1021 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 ZFRQ96KR1 1074 aaKnown RBP17.31■□□□□ 0.36
PTPRA-206ENST00000430705 SPATA32Q96LK8 384 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 USP18Q9UMW8 372 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 CPQQ9Y646 472 aa17.31■□□□□ 0.36
PTPRA-206ENST00000430705 PHACTR2O75167 634 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 RPN1P04843 607 aaKnown RBP17.3■□□□□ 0.36
PTPRA-206ENST00000430705 CYP17A1P05093 508 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 PFKLP17858 780 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 DRD1P21728 446 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 CNR2P34972 360 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 ASPAP45381 313 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 PGFP49763 221 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 DPYDQ12882 1025 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 IFRD2Q12894 506 aaPredicted RBP17.3■□□□□ 0.36
PTPRA-206ENST00000430705 ZNF667Q5HYK9 610 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 FILIP1Q7Z7B0 1213 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 SFTPA1Q8IWL2 248 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 FUKQ8N0W3 1084 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 GPR161Q8N6U8 529 aaKnown RBP17.3■□□□□ 0.36
PTPRA-206ENST00000430705 RPLP0P6Q8NHW5 317 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 SCAMP5Q8TAC9 235 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 SECISBP2LQ93073 1101 aaKnown RBP17.3■□□□□ 0.36
PTPRA-206ENST00000430705 HHIPQ96QV1 700 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 SMPD4Q9NXE4 827 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 IL37Q9NZH6 218 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 RAB23Q9ULC3 237 aa17.3■□□□□ 0.36
PTPRA-206ENST00000430705 BEST1O76090 585 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 RHOBTB3O94955 611 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 CCDC130P13994 396 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 AP3M2P53677 418 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 ATXN1P54253 815 aaKnown RBP17.29■□□□□ 0.36
PTPRA-206ENST00000430705 KRT85P78386 507 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 LMNB2Q03252 620 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 SV2AQ7L0J3 742 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.29■□□□□ 0.36
PTPRA-206ENST00000430705 TMC2Q8TDI7 906 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 TWNKQ96RR1 684 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 SMOQ99835 787 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
PTPRA-206ENST00000430705 FAM92AA1XBS5 289 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 K7EQS6 105 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 AKAP3O75969 853 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 ASS1P00966 412 aaKnown RBP17.28■□□□□ 0.36
PTPRA-206ENST00000430705 MYL1P05976 194 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 TRIM49P0CI25 452 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 TRIM49CP0CI26 452 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 SYKP43405 635 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 PDE6CP51160 858 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 SLC5A3P53794 718 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 ZCWPW2Q504Y3 356 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 ACOT1Q86TX2 421 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 C12orf40Q86WS4 652 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 NUP93Q8N1F7 819 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 GAB3Q8WWW8 586 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 WBP2Q969T9 261 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 APOBEC3GQ9HC16 384 aaKnown RBP17.28■□□□□ 0.36
PTPRA-206ENST00000430705 KRT82Q9NSB4 513 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 SEMA4GQ9NTN9 838 aa17.28■□□□□ 0.36
PTPRA-206ENST00000430705 CCDC163A0A0D9SF12 145 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 COCHO43405 550 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 LRP3O75074 770 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 NFATC1O95644 943 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 HLA-DRAP01903 254 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 ZDHHC11BP0C7U3 371 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 YWHAQP27348 245 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 PPP3CCP48454 512 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 NDST1P52848 882 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 AMPD2Q01433 879 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 PPP3CAQ08209 521 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 NFIL3Q16649 462 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 FBXO43Q4G163 708 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 CEP135Q66GS9 1140 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 KRBA2Q6ZNG9 492 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 PRR23CQ6ZRP0 262 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 GPRIN1Q7Z2K8 1008 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 KBTBD6Q86V97 674 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 FBXO32Q969P5 355 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 SMARCD1Q96GM5 515 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 SLITRK1Q96PX8 696 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 CCSER2Q9H7U1 834 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 DMAP1Q9NPF5 467 aaPredicted RBP17.27■□□□□ 0.36
PTPRA-206ENST00000430705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.27■□□□□ 0.367e-7■■■■■ 70.3
PTPRA-206ENST00000430705 EHD2Q9NZN4 543 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 GMIPQ9P107 970 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 CFAP97Q9P2B7 532 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 SLC8A2Q9UPR5 921 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 MAPK8IP1Q9UQF2 711 aa17.27■□□□□ 0.36
PTPRA-206ENST00000430705 A0A1W2PQ27 194 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms