RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 MRE11P49959 708 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 SLC5A3P53794 718 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 MLLT6P55198 1093 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-221ENST00000430433 STX17P56962 302 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 PAK1Q13153 545 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 MTF1Q14872 753 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 PDGFRLQ15198 375 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 ZNF394Q53GI3 561 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 PAQR9Q6ZVX9 377 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 FILIP1Q7Z7B0 1213 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 RALGPS2Q86X27 583 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-221ENST00000430433 TRIML1Q8N9V2 468 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 SH3RF2Q8TEC5 729 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 SLC35C1Q96A29 364 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 JAKMIP2Q96AA8 810 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 DUSP9Q99956 384 aaKnown RBP12.03□□□□□ -0.48
MRPL55-221ENST00000430433 EBF3Q9H4W6 596 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 GCNT4Q9P109 453 aa12.03□□□□□ -0.48
MRPL55-221ENST00000430433 SHISA7A6NL88 538 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 ARSAP15289 507 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 RPS9P46781 194 aaKnown RBP12.02□□□□□ -0.49
MRPL55-221ENST00000430433 IFNAR2P48551 515 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 MAP3K7CLP57077 242 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 YWHAEP62258 255 aaKnown RBP12.02□□□□□ -0.49
MRPL55-221ENST00000430433 USP4Q13107 963 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 RUNX3Q13761 415 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 LRRC32Q14392 662 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 ZNF77Q15935 545 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 TRIM68Q6AZZ1 485 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 SCAMP5Q8TAC9 235 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 RIN3Q8TB24 985 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 TATDN2Q93075 761 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 CLDN23Q96B33 292 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 CYFIP2Q96F07 1278 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 FAXDC2Q96IV6 333 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 HEXIM2Q96MH2 286 aaKnown RBP12.02□□□□□ -0.49
MRPL55-221ENST00000430433 HNRNPABQ99729 332 aaKnown RBP12.02□□□□□ -0.49
MRPL55-221ENST00000430433 SMOQ99835 787 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 ARID3AQ99856 593 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 FAM83CQ9BQN1 747 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 CISHQ9NSE2 258 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 DUS2Q9NX74 493 aaKnown RBP12.02□□□□□ -0.49
MRPL55-221ENST00000430433 SMPD4Q9NXE4 827 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 ARHGAP26Q9UNA1 814 aa12.02□□□□□ -0.49
MRPL55-221ENST00000430433 FGFR1OPO95684 399 aaKnown RBP12.01□□□□□ -0.49
MRPL55-221ENST00000430433 GNA14O95837 355 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 NBL1P41271 181 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 FMO5P49326 533 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 CETN1Q12798 172 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 LRMPQ12912 555 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 CUL2Q13617 745 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 FOXR2Q6PJQ5 311 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 TXNDC11Q6PKC3 985 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 CPA6Q8N4T0 437 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 WHAMMQ8TF30 809 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 OVCA2Q8WZ82 227 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 ATP2A3Q93084 1043 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 NACA2Q9H009 215 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 CHRDQ9H2X0 955 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 FBXO44Q9H4M3 255 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 LMAN1LQ9HAT1 526 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 CSNK1G1Q9HCP0 422 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 HPS4Q9NQG7 708 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 COMMD8Q9NX08 183 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 GMIPQ9P107 970 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 CHORDC1Q9UHD1 332 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-221ENST00000430433 COQ4Q9Y3A0 265 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 CPQQ9Y646 472 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 WNT6Q9Y6F9 365 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 ANAPC1Q9H1A4 1944 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 MYH10P35580 1976 aa12.01□□□□□ -0.49
MRPL55-221ENST00000430433 KIF26AQ9ULI4 1882 aaPredicted RBP12□□□□□ -0.49
MRPL55-221ENST00000430433 LEFTY2O00292 366 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 TNFRSF10BO14763 440 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 BEST1O76090 585 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 OAS1P00973 400 aaKnown RBP12□□□□□ -0.49
MRPL55-221ENST00000430433 SP9P0CG40 484 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 MBL2P11226 248 aaPredicted RBP12□□□□□ -0.49
MRPL55-221ENST00000430433 SLC7A9P82251 487 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 AMPD2Q01433 879 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 CSTF1Q05048 431 aaKnown RBP12□□□□□ -0.49
MRPL55-221ENST00000430433 MTAPQ13126 283 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 FZD5Q13467 585 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 PON2Q15165 354 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 HECTD3Q5T447 861 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 ZC3H14Q6PJT7 736 aaKnown RBP12□□□□□ -0.49
MRPL55-221ENST00000430433 CLEC20AQ6ZU45 233 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 DDX42Q86XP3 938 aaKnown RBP eCLIP12□□□□□ -0.49
MRPL55-221ENST00000430433 ZNF687Q8N1G0 1237 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 SLC4A11Q8NBS3 891 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 OSCP1Q8WVF1 389 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 TMEM176AQ96HP8 235 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 NT5C1BQ96P26 610 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 IER2Q9BTL4 223 aa12□□□□□ -0.49
MRPL55-221ENST00000430433 SRRTQ9BXP5 876 aaKnown RBP12□□□□□ -0.49
MRPL55-221ENST00000430433 RNF38Q9H0F5 515 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms