RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 C11orf74Q86VG3 221 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 XYLT2Q9H1B5 865 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 LINC00597Q9H2U6 94 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 SLC39A2Q9NP94 309 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 VPS45Q9NRW7 570 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 NME7Q9Y5B8 376 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 CPQQ9Y646 472 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 CNOT1A5YKK6 2376 aaKnown RBP15.84■□□□□ 0.13
MSH5-208ENST00000429846 PHACTR2O75167 634 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 F13A1P00488 732 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 CYP17A1P05093 508 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
MSH5-208ENST00000429846 OPRD1P41143 372 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 ME1P48163 572 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 MYL6P60660 151 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 TAF10Q12962 218 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 SF3A2Q15428 464 aaKnown RBP15.84■□□□□ 0.13
MSH5-208ENST00000429846 RESP18Q5W5W9 173 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 FILIP1Q7Z7B0 1213 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 CEP57L1Q8IYX8 460 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 TSTD1Q8NFU3 115 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 USP33Q8TEY7 942 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 TMEM174Q8WUU8 243 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 ZNF516Q92618 1163 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 TNIP3Q96KP6 325 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 CNTNAP3BQ96NU0 1288 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 CNTNAP3Q9BZ76 1288 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 ZNF518BQ9C0D4 1074 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 GZF1Q9H116 711 aaPredicted RBP15.84■□□□□ 0.13
MSH5-208ENST00000429846 DUSP15Q9H1R2 295 aaPredicted RBP15.84■□□□□ 0.13
MSH5-208ENST00000429846 BLZF1Q9H2G9 400 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 DPEP3Q9H4B8 488 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 TBC1D14Q9P2M4 693 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 NXF1Q9UBU9 619 aaKnown RBP15.84■□□□□ 0.13
MSH5-208ENST00000429846 CFAP45Q9UL16 551 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 PCDHA7Q9UN72 937 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 EPG5Q9HCE0 2579 aa15.84■□□□□ 0.13
MSH5-208ENST00000429846 CACNA1BQ00975 2339 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 ADH1CP00326 375 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 HSP90AA1P07900 732 aaKnown RBP15.83■□□□□ 0.12
MSH5-208ENST00000429846 YWHAQP27348 245 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 DGKEP52429 567 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 CLDN10P78369 228 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 BIRC3Q13489 604 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 GAB4Q2WGN9 574 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 ZNF699Q32M78 642 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 HSF5Q4G112 596 aaPredicted RBP15.83■□□□□ 0.12
MSH5-208ENST00000429846 ZNF667Q5HYK9 610 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 HSCBQ8IWL3 235 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 ADGRG2Q8IZP9 1017 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 NUP93Q8N1F7 819 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 OTUB2Q96DC9 234 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 B3GNT5Q9BYG0 378 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 RNF38Q9H0F5 515 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 TMEM30AQ9NV96 361 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 POLR3BQ9NW08 1133 aaPredicted RBP15.83■□□□□ 0.12
MSH5-208ENST00000429846 MMP17Q9ULZ9 603 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 NUP205Q92621 2012 aa15.83■□□□□ 0.12
MSH5-208ENST00000429846 K7EQS6 105 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 ABL1P00519 1130 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 MBL2P11226 248 aaPredicted RBP15.82■□□□□ 0.12
MSH5-208ENST00000429846 CASP1P29466 404 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 AFMP43652 599 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 TUBP50607 506 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 CACNA2D1P54289 1103 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 MRPS21P82921 87 aaKnown RBP15.82■□□□□ 0.12
MSH5-208ENST00000429846 CUL4BQ13620 913 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 DHCR24Q15392 516 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 USP39Q53GS9 565 aaKnown RBP15.82■□□□□ 0.12
MSH5-208ENST00000429846 FAM35AQ86V20 835 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 RASSF3Q86WH2 238 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 SLC9A9Q8IVB4 645 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 PARD3BQ8TEW8 1205 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 FBXO32Q969P5 355 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 SMARCD1Q96GM5 515 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 CNOT6LQ96LI5 555 aaKnown RBP15.82■□□□□ 0.12
MSH5-208ENST00000429846 DUSP9Q99956 384 aaKnown RBP15.82■□□□□ 0.12
MSH5-208ENST00000429846 DMAP1Q9NPF5 467 aaPredicted RBP15.82■□□□□ 0.12
MSH5-208ENST00000429846 MYH10P35580 1976 aa15.82■□□□□ 0.12
MSH5-208ENST00000429846 E2F8A0AVK6 867 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 LRRIQ3A6PVS8 624 aaPredicted RBP15.81■□□□□ 0.12
MSH5-208ENST00000429846 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.81■□□□□ 0.12
MSH5-208ENST00000429846 CLDN5O00501 218 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 CLSTN1O94985 981 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 MYL1P05976 194 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 SLFN14P0C7P3 912 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 P4HA1P13674 534 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 IFRD2Q12894 506 aaPredicted RBP15.81■□□□□ 0.12
MSH5-208ENST00000429846 NCOA4Q13772 614 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 CCDC6Q16204 474 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 C2orf27AQ580R0 203 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 FOXD4L5Q5VV16 416 aaPredicted RBP15.81■□□□□ 0.12
MSH5-208ENST00000429846 SNX30Q5VWJ9 437 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 PLEKHO2Q8TD55 490 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 FOXD4L4Q8WXT5 416 aaPredicted RBP15.81■□□□□ 0.12
MSH5-208ENST00000429846 SMYD3Q9H7B4 428 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 EXOC1Q9NV70 894 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 COMMD8Q9NX08 183 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 SMPD4Q9NXE4 827 aa15.81■□□□□ 0.12
MSH5-208ENST00000429846 CFAP97Q9P2B7 532 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms