RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ROR1Q01973 937 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 NOGQ13253 232 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 C15orf59Q2T9L4 293 aaPredicted RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 CAPRIN2Q6IMN6 1127 aaKnown RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 ARID3BQ8IVW6 561 aaPredicted RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 UNC45BQ8IWX7 931 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 C12orf56Q8IXR9 622 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 KATNAL2Q8IYT4 538 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 GRAMD1AQ96CP6 724 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 GPRASP2Q96D09 838 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 FAM210AQ96ND0 272 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 ACAP3Q96P50 834 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 CGRRF1Q99675 332 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 TBC1D10AQ9BXI6 508 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 MANSC1Q9H8J5 431 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 SLC12A4Q9UP95 1085 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 SMG5Q9UPR3 1016 aaKnown RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 MAST2Q6P0Q8 1798 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 RANBP2P49792 3224 aaKnown RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 ADAMTSL1Q8N6G6 1762 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 COL11A2P13942 1736 aaPredicted RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 IQANK1A0A1B0GTG1 560 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 KBTBD13C9JR72 458 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 H3BRJ5 948 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 UNC5CO95185 931 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 C4BPAP04003 597 aaKnown RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 KRT7P08729 469 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 PDE1BQ01064 536 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 OGDHQ02218 1023 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 PIGHQ14442 188 aaPredicted RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 TMEM132BQ14DG7 1078 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 ZCCHC23Q6ZST2 131 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 OTOAQ7RTW8 1153 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 SLC25A41Q8N5S1 370 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 TFAP2BQ92481 460 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 CENPOQ9BU64 300 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 MECRQ9BV79 373 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 DHX35Q9H5Z1 703 aaKnown RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 MRPL42Q9Y6G3 142 aaKnown RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 SMIM24O75264 130 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 CIB2O75838 187 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 SESN2P58004 480 aaPredicted RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 FAAP100Q0VG06 881 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 BNIP1Q12981 228 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 NR1H3Q13133 447 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 CAPSQ13938 189 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 RCN1Q15293 331 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 SGSM1Q2NKQ1 1148 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 KLHL38Q2WGJ6 581 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 KBTBD12Q3ZCT8 623 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 FNBP1LQ5T0N5 605 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 PPIL6Q8IXY8 311 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 SAMD3Q8N6K7 520 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 RFWD2Q8NHY2 731 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 FAM49AQ9H0Q0 323 aaPredicted RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 C17orf75Q9HAS0 396 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 ZC3H7BQ9UGR2 993 aaKnown RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 NR2E3Q9Y5X4 410 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 TCRBV7S3A2A0A539 114 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 USP2O75604 605 aaPredicted RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 MYL2P10916 166 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 IVDP26440 423 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 RPL22P35268 128 aaKnown RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 SNRPFP62306 86 aaKnown RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 ZNF200P98182 395 aaPredicted RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 SP2Q02086 613 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 C1QBPQ07021 282 aaKnown RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 CFAP157Q5JU67 520 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 GLRA4Q5JXX5 417 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 ARMC3Q5W041 872 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 ISLR2Q6UXK2 745 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 OR6B3Q8NGW1 331 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 NLRP7Q8WX94 980 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 CPB2Q96IY4 423 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 STRA6Q9BX79 667 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 CHKBQ9Y259 395 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 COQ4Q9Y3A0 265 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 CCDC160A6NGH7 325 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 MED7O43513 233 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 ZC3H11AO75152 810 aaKnown RBP eCLIP8.4□□□□□ -1.06
HPS4-205ENST00000429411 MTA2O94776 668 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 KCNA2P16389 499 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 NCF2P19878 526 aaPredicted RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 NAMPTP43490 491 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 POLE2P56282 527 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 MORF4L2Q15014 288 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 TOMM20Q15388 145 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 Q3C1V9 767 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 GJC2Q5T442 439 aaPredicted RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 COL13A1Q5TAT6 717 aaPredicted RBP8.4□□□□□ -1.06
HPS4-205ENST00000429411 SH3PXD2AQ5TCZ1 1133 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 LGSNQ5TDP6 509 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 NIPA1Q7RTP0 329 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 TAS1R3Q7RTX0 852 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 NUDCD3Q8IVD9 361 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 ALLCQ8N6M5 410 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 DEPDC1BQ8WUY9 529 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 COPS5Q92905 334 aa8.4□□□□□ -1.06
HPS4-205ENST00000429411 SPATA33Q96N06 139 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms