RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 MTMR11A4FU01 709 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 YJEFN3A6XGL0 299 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 E7ENQ6 273 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 MDM4O15151 490 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 RFPL2O75678 378 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 OAZ2O95190 189 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 EFEMP2O95967 443 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 GJA1P17302 382 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 LHX1P48742 406 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 SMTNL2Q2TAL5 461 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 USP41Q3LFD5 358 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 FAM102AQ5T9C2 384 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 SYPL2Q5VXT5 272 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 FAM171BQ6P995 826 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ADAT2Q7Z6V5 191 aaKnown RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 VPS36Q86VN1 386 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 XYLT1Q86Y38 959 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 CMTR2Q8IYT2 770 aaKnown RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 TMEM35BQ8NCS4 154 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 CTNNBL1Q8WYA6 563 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 KRT35Q92764 455 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ACBD6Q9BR61 282 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ANAPC7Q9UJX3 599 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 PLXNA3P51805 1871 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 TRAPPC3O43617 180 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 CXCL14O95715 111 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 SOD2P04179 222 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 NPR3P17342 541 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ATF6P18850 670 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 BMPR1AP36894 532 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 TKTL1P51854 596 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 GABPB1Q06547 395 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZNF211Q13398 564 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 MRPL58Q14197 206 aaKnown RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 KCNT1Q5JUK3 1230 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 DAAM2Q86T65 1068 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 UNC93AQ86WB7 457 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 SPATA2LQ8IUW3 424 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ANKRD52Q8NB46 1076 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 SLC22A17Q8WUG5 538 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 LRRN4Q8WUT4 740 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 CLP1Q92989 425 aaKnown RBP10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 FAM149B1Q96BN6 582 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 IQCDQ96DY2 449 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 MS4A14Q96JA4 679 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 TNIP3Q96KP6 325 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ULBP1Q9BZM6 244 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 ENTPD7Q9NQZ7 604 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 OSER1Q9NX31 292 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 HESX1Q9UBX0 185 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 CDH9Q9ULB4 789 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 PCDHB12Q9Y5F1 795 aa10.03□□□□□ -0.8
HMGCLL1-206ENST00000428842 HHLA1C9JL84 531 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 TMEM189-UBE2V1I3L0A0 370 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 FAM200BP0CF97 657 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 SSR1P43307 286 aaKnown RBP10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 BPIFB4P59827 614 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 KRT83P78385 493 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 ANKS1BQ7Z6G8 1248 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 RNF168Q8IYW5 571 aaPredicted RBP10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 THEM5Q8N1Q8 247 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 TMEM86AQ8N2M4 240 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 ARFGAP1Q8N6T3 406 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 C12orf76Q8N812 135 aaPredicted RBP10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZNF564Q8TBZ8 553 aaPredicted RBP10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 SPPL3Q8TCT6 385 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 C18orf8Q96DM3 657 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 CAPZA3Q96KX2 299 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 HNRNPABQ99729 332 aaKnown RBP10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 FAM118BQ9BPY3 351 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 DUSP16Q9BY84 665 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZCWPW1Q9H0M4 648 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 CYP4F11Q9HBI6 524 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZNF446Q9NWS9 450 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 HCFC1R1Q9NWW0 138 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 PCSK1NQ9UHG2 260 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 PCDHGC3Q9UN70 934 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 ANKRD62A6NC57 917 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 TBC1D4O60343 1298 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 TADA3O75528 432 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 CCDC172P0C7W6 258 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 LAG3P18627 525 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 PCSK1P29120 753 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 GLUD2P49448 558 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 SLC5A3P53794 718 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 YWHAEP62258 255 aaKnown RBP10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 GPC5P78333 572 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 TSPY1Q01534 308 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 PPP2R2DQ66LE6 453 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZNF280DQ6N043 979 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 KRT222Q8N1A0 295 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 CCDC33Q8N5R6 958 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 LRCH3Q96II8 777 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 SLC9A7Q96T83 725 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 IGFLR1Q9H665 355 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 NMUR1Q9HB89 426 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 NAALADL1Q9UQQ1 740 aa10.02□□□□□ -0.81
HMGCLL1-206ENST00000428842 COLQQ9Y215 455 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms