RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 MYBPC2Q14324 1141 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 HSP90AA2PQ14568 343 aaPredicted RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 PTPRNQ16849 979 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 PABPC1LQ4VXU2 614 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 TANGO2Q6ICL3 276 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 FUT10Q6P4F1 479 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 SLC39A4Q6P5W5 647 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 MPZL3Q6UWV2 235 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 LYPD8Q6UX82 237 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 CD300LGQ6UXG3 332 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 ALKAL1Q6UXT8 129 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 ZPBP2Q6X784 338 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 Q6ZS52 159 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 HAUS6Q7Z4H7 955 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 DEFB124Q8NES8 71 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 HNRNPLLQ8WVV9 542 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 TSC1Q92574 1164 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 IRF7Q92985 503 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 ELSPBP1Q96BH3 223 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 LRIG1Q96JA1 1093 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 ZMAT2Q96NC0 199 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 EIF3CQ99613 913 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 CHP1Q99653 195 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 METTL14Q9HCE5 456 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 RBM12Q9NTZ6 932 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 FNIP2Q9P278 1114 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 LARSQ9P2J5 1176 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 FBXW11Q9UKB1 542 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 ADAM28Q9UKQ2 775 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 MRPS23Q9Y3D9 190 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 UBE4BO95155 1302 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 K7ENM7 598 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 FANCGO15287 622 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 SLC16A3O15427 465 aaKnown RBP9.27□□□□□ -0.93
HDAC1-202ENST00000428704 KIF5CO60282 957 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 FAM189A1O60320 539 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 FAM13AO94988 1023 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 PIGRP01833 764 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 THP07101 528 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 HARSP12081 509 aaKnown RBP9.27□□□□□ -0.93
HDAC1-202ENST00000428704 RPL13P26373 211 aaKnown RBP9.27□□□□□ -0.93
HDAC1-202ENST00000428704 HOXA6P31267 233 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 HOXA9P31269 272 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 ARHGAP25P42331 645 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 SMTNP53814 917 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 MCCD1P59942 119 aaPredicted RBP9.27□□□□□ -0.93
HDAC1-202ENST00000428704 MCL1Q07820 350 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 KCNMA1Q12791 1236 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 ADAM9Q13443 819 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 USP41Q3LFD5 358 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 SEZ6Q53EL9 994 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 RTP2Q5QGT7 225 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 C3orf58Q8NDZ4 430 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 HASPINQ8TF76 798 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 TRMT61BQ9BVS5 477 aaKnown RBP9.27□□□□□ -0.93
HDAC1-202ENST00000428704 COLEC11Q9BWP8 271 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 STRA6Q9BX79 667 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 PARVGQ9HBI0 331 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 GOLGA2P5Q9HBQ8 144 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 TMEM9BQ9NQ34 198 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 HCFC1R1Q9NWW0 138 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 GDE1Q9NZC3 331 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 FBXL5Q9UKA1 691 aa9.27□□□□□ -0.93
HDAC1-202ENST00000428704 RALGAPA1Q6GYQ0 2036 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 SMIM28A0A1B0GU29 152 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 SSU72P8A0A1W2PR75 194 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 EFCAB8A8MWE9 144 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 TISP43B9A030 160 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 TMEM189-UBE2V1I3L0A0 370 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 TBCAO75347 108 aaKnown RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 PRB1P04280 392 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 KCNE1P15382 129 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 NMT1P30419 496 aaKnown RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 GDI1P31150 447 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 HOXC13P31276 330 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 RDXP35241 583 aaKnown RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 HOXD13P35453 343 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 PXNP49023 591 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 CLCNKBP51801 687 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 SNRPFP62306 86 aaKnown RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 CREB5Q02930 508 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 STRN3Q13033 797 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 ALCAMQ13740 583 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 SLC10A6Q3KNW5 377 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 UAP1L1Q3KQV9 507 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 ZC2HC1CQ53FD0 456 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 PRSS55Q6UWB4 352 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 STXBP4Q6ZWJ1 553 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 ZNF720Q7Z2F6 126 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 APBB1IPQ7Z5R6 666 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 SFR1Q86XK3 245 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 MAP4K3Q8IVH8 894 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 MYCT1Q8N699 235 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 SLC7A14Q8TBB6 771 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 BAP1Q92560 729 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 WDR24Q96S15 920 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 DESI2Q9BSY9 194 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 CCDC94Q9BW85 323 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms