RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SNRPFP62306 86 aaKnown RBP7.54□□□□□ -1.2
CNOT4-206ENST00000428680 GPC5P78333 572 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 FOXK2Q01167 660 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 GPR158Q5T848 1215 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 DENND5BQ6ZUT9 1274 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 RNF25Q96BH1 459 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-206ENST00000428680 RAD9AQ99638 391 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 ZCCHC2Q9C0B9 1178 aaKnown RBP7.54□□□□□ -1.2
CNOT4-206ENST00000428680 SELENONQ9NZV5 590 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 JRKLQ9Y4A0 524 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 LAMTOR5O43504 91 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 SLC26A4O43511 780 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 IL1BP01584 269 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 SERPING1P05155 500 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 CXCL8P10145 99 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 ALPPL2P10696 532 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 ACAT1P24752 427 aaKnown RBP7.54□□□□□ -1.2
CNOT4-206ENST00000428680 HPDP32754 393 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-206ENST00000428680 LIG3P49916 1009 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 BCAT1P54687 386 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 POU5F1BQ06416 359 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 TUBB2AQ13885 445 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 SIRT2Q8IXJ6 389 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 PPP1R13BQ96KQ4 1090 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 TUBB2BQ9BVA1 445 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 BBS2Q9BXC9 721 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 GIMAP4Q9NUV9 329 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 GULP1Q9UBP9 304 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 GON4LQ3T8J9 2241 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 ATP9BO43861 1147 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 FGFR1P11362 822 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 SDHBP21912 280 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 ICAM3P32942 547 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 NPTX2P47972 431 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 STAT4Q14765 748 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 CCDC62Q6P9F0 684 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 TRMT11Q7Z4G4 463 aaKnown RBP7.54□□□□□ -1.2
CNOT4-206ENST00000428680 TSTD1Q8NFU3 115 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 DEPDC1BQ8WUY9 529 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 SENP8Q96LD8 212 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 RMDN2Q96LZ7 410 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 AGAP3Q96P47 875 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 SAR1BQ9Y6B6 198 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3DA0A087WVF3 549 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3IA0A087WXS9 549 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3EA0A087X179 549 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3KA0A087X1G2 549 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 NPHP3-ACAD11A0A0J9YXS1 232 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3FA6NER0 549 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3LB9A6J9 549 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 FAM47E-STBD1D6RA91 191 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TRIM66O15016 1216 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ATG13O75143 517 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 CIB2O75838 187 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3HP0C7X1 549 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 EDNRBP24530 442 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 MSH2P43246 934 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 MARSP56192 900 aaKnown RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ZRANB3Q5FWF4 1079 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TMEM164Q5U3C3 297 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3GQ6DHY5 549 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3CQ6IPX1 549 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D3Q8IZP1 549 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 CASP10Q92851 521 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 CFAP36Q96G28 342 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PHF20Q9BVI0 1012 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 NUP85Q9BW27 656 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 CARD6Q9BX69 1037 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 NUF2Q9BZD4 464 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 MTMR12Q9C0I1 747 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ASB7Q9H672 318 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 COPS7BQ9H9Q2 264 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 SOHLH2Q9NX45 425 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 SUN2Q9UH99 717 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PCDHB11Q9Y5F2 797 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 CCDC66A2RUB6 948 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 APOL1O14791 398 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 RASSF9O75901 435 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 MMP3P08254 477 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 NUMBP49757 651 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBX4P57082 545 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 SKP1P63208 163 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ZBED6P86452 979 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TTLL9Q3SXZ7 439 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ZC2HC1CQ53FD0 456 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 MOXD1Q6UVY6 613 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 NPAS4Q8IUM7 802 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PIK3R5Q8WYR1 880 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 RAPGEF5Q92565 580 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PPP1R2P1Q96PQ5 205 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PNKPQ96T60 521 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 HEMGNQ9BXL5 484 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PDGFCQ9NRA1 345 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 IMPACTQ9P2X3 320 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 RSPH14Q9UHP6 348 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PADI3Q9ULW8 664 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 GOLGA8QA0A0J9YX86 632 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 GOLGA8OA6NCC3 632 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms