RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 NUSAP1Q9BXS6 441 aaKnown RBP19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 FGFBP2Q9BYJ0 223 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 INTS13Q9NVM9 706 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 EHD2Q9NZN4 543 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 EVLQ9UI08 416 aaPredicted RBP19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 PTPRJQ12913 1337 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 ZNF840PA6NDX5 716 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 SGK1O00141 431 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 TRIM66O15016 1216 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 APODP05090 189 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 P2RY2P41231 377 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 SLC7A9P82251 487 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 MESP2Q0VG99 397 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 LMAN2Q12907 356 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 RESTQ13127 1097 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 C8orf34Q49A92 452 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 KIAA1211LQ6NV74 962 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 LIMS2Q7Z4I7 341 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 ADGRG2Q8IZP9 1017 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 GPD1LQ8N335 351 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 IL17RCQ8NAC3 791 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 HMGB4Q8WW32 186 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 MMS19Q96T76 1030 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 TTLL2Q9BWV7 592 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 RNF38Q9H0F5 515 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 POLMQ9NP87 494 aaPredicted RBP19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 CFAP97Q9P2B7 532 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 CLIC4Q9Y696 253 aa19.54■□□□□ 0.72
UPK3BP1-201ENST00000428678 TMEM8BA6NDV4 472 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 F8VP50 259 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 TNFRSF10BO14763 440 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 PRPF6O94906 941 aaKnown RBP19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 KAT7O95251 611 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 WARSP23381 471 aaKnown RBP19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 PTGER3P43115 390 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 PPP3CCP48454 512 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 KDSRQ06136 332 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 DUOXA2Q1HG44 320 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 MDH1BQ5I0G3 518 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 PGBD3Q8N328 593 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 FRMD1Q8N878 549 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 PCED1BQ96HM7 432 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 CLIC6Q96NY7 704 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 FNBP1Q96RU3 617 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 TMEM121BQ9BXQ6 578 aaPredicted RBP19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 ZDHHC4Q9NPG8 344 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 ARHGEF4Q9NR80 690 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 PANK4Q9NVE7 773 aa19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 FBXO2Q9UK22 296 aaPredicted RBP19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 TNRC6BQ9UPQ9 1833 aaKnown RBP19.53■□□□□ 0.72
UPK3BP1-201ENST00000428678 NBEAQ8NFP9 2946 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 VPS37CA5D8V6 355 aaPredicted RBP19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 ZNF233A6NK53 670 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 ADH1CP00326 375 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 ADH5P11766 374 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 EIF2DP41214 584 aaKnown RBP19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 NOP14P78316 857 aaKnown RBP19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 IFRD2Q12894 506 aaPredicted RBP19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 HSF5Q4G112 596 aaPredicted RBP19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 EOGTQ5NDL2 527 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 EMC10Q5UCC4 262 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 RHBDF2Q6PJF5 856 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 HS2ST1Q7LGA3 356 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 C12orf40Q86WS4 652 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 SYT12Q8IV01 421 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 KIAA1958Q8N8K9 716 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 MYCBPAPQ8TBZ2 947 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 SNX25Q9H3E2 840 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 SLC32A1Q9H598 525 aa19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 MBD1Q9UIS9 605 aaPredicted RBP19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 SRPRBQ9Y5M8 271 aaKnown RBP19.52■□□□□ 0.72
UPK3BP1-201ENST00000428678 ATXN2Q99700 1313 aaKnown RBP19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 PLXND1Q9Y4D7 1925 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 TCRBV21S2A2A0A5A6 115 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 OLFM2O95897 454 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 OAS1P00973 400 aaKnown RBP19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 MBL2P11226 248 aaPredicted RBP19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 ENGP17813 658 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 STAT6P42226 847 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 GRIA2P42262 883 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 TAF10Q12962 218 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 BYSLQ13895 437 aaKnown RBP19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 SURF1Q15526 300 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 TDRD10Q5VZ19 366 aaKnown RBP19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 LYSMD4Q5XG99 296 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 CCDC73Q6ZRK6 1079 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 DDX42Q86XP3 938 aaKnown RBP eCLIP19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 CBWD2Q8IUF1 395 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 GATA6Q92908 595 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 C8orf48Q96LL4 319 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 SLITRK1Q96PX8 696 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 PANK2Q9BZ23 570 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 TMEM74BQ9NUR3 256 aa19.51■□□□□ 0.71
UPK3BP1-201ENST00000428678 FRMD3A2A2Y4 597 aa19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 KIAA0391O15091 583 aaKnown RBP19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 HYAL3O43820 417 aaPredicted RBP19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 CFIP05156 583 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms