RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 GHRP10912 638 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 KLRC2P26717 231 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CD52P31358 61 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 ACTN2P35609 894 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 SLCO1A2P46721 670 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CDH6P55285 790 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 OTUD4Q01804 1114 aaKnown RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 SP3Q02447 781 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 FAM182AQ5T1J6 154 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 IZUMO3Q5VZ72 239 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 ARHGAP17Q68EM7 881 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 RHBDF2Q6PJF5 856 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 LEKR1Q6ZMV7 388 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 B4GALNT4Q76KP1 1039 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 OSTM1Q86WC4 334 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 RFX6Q8HWS3 928 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 TAB3Q8N5C8 712 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 ANKRD52Q8NB46 1076 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 UPF3AQ9H1J1 476 aaKnown RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CDC42EP4Q9H3Q1 356 aaKnown RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 TIMM13Q9Y5L4 95 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CLDN5O00501 218 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 NUDT17P0C025 328 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 TFE3P19532 575 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 PTPN7P35236 360 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 PCK1P35558 622 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 IRAK1P51617 712 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 CLCNKBP51801 687 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 VCPP55072 806 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 EIF3BP55884 814 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 MAGOHP61326 146 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 GNGT1P63211 74 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 GUCY1A3Q02108 690 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 LMNB2Q03252 620 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 BST2Q10589 180 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 GPS1Q13098 491 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 ACAP1Q15027 740 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 KYNUQ16719 465 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 FAM172AQ8WUF8 416 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 TRMT13Q9NUP7 481 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 GPATCH2LQ9NWQ4 482 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 PADI3Q9ULW8 664 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 ARL5CA6NH57 179 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 THP07101 528 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 TKTP29401 623 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 SDC4P31431 198 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 BCAT1P54687 386 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 OASLQ15646 514 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 ZSCAN26Q16670 478 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 SPDYCQ5MJ68 293 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 LRRC31Q6UY01 552 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 CYP4V2Q6ZWL3 525 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 ALLCQ8N6M5 410 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 B3GALNT2Q8NCR0 500 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 SMC1BQ8NDV3 1235 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 NDRG1Q92597 394 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 TNIP3Q96KP6 325 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 PAAF1Q9BRP4 392 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 MAK16Q9BXY0 300 aaKnown RBP10.9□□□□□ -0.66
HDAC9-210ENST00000428307 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
HDAC9-210ENST00000428307 CASTOR2A6NHX0 329 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 GPR182O15218 404 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 SETSIPP0DME0 302 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 PECAM1P16284 738 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 SCNN1GP51170 649 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 ATXN1P54253 815 aaKnown RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 GDF10P55107 478 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 NOGQ13253 232 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 ZC3H12AQ5D1E8 599 aaKnown RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 DRICH1Q6PGQ1 229 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 NPNTQ6UXI9 565 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 BBS12Q6ZW61 710 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 SLC35B2Q8TB61 432 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 NKD2Q969F2 451 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 SENP8Q96LD8 212 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 ADAM7Q9H2U9 754 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 DRG1Q9Y295 367 aaKnown RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 EFR3BQ9Y2G0 817 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 KIF3CO14782 793 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 MGEA5O60502 916 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 TRPA1O75762 1119 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 BEST1O76090 585 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 POMCP01189 267 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 LRPAP1P30533 357 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 RABGGTBP53611 331 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 NRLP54845 237 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 SNX16P57768 344 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 PAN2Q504Q3 1202 aaKnown RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 HP1BP3Q5SSJ5 553 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 KDM7AQ6ZMT4 941 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 LIMS2Q7Z4I7 341 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 PIGZQ86VD9 579 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 FUKQ8N0W3 1084 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 C3orf58Q8NDZ4 430 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 KLHDC9Q8NEP7 349 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 EPS8L3Q8TE67 593 aaKnown RBP10.89□□□□□ -0.67
HDAC9-210ENST00000428307 STK32AQ8WU08 396 aa10.89□□□□□ -0.67
HDAC9-210ENST00000428307 ADAM33Q9BZ11 813 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms