RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SLC20A1Q8WUM9 679 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 TTC1Q99614 292 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 WDR83Q9BRX9 315 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 OLAHQ9NV23 265 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 VAV3Q9UKW4 847 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 PRPF19Q9UMS4 504 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 WNK2Q9Y3S1 2297 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 NPHP3-ACAD11A0A0J9YXS1 232 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 TMEM110-MUSTN1A8MSY1 372 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 H3BRJ5 948 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 GCATO75600 419 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 HSPA1AP0DMV8 641 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 HSPA1BP0DMV9 641 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 CYP2D6P10635 497 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 MYL2P10916 166 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CDK9P50750 372 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 TXNL4AP83876 142 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 CCNIQ14094 377 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 SH3D19Q5HYK7 790 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 TMEM110Q86TL2 294 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 GLIS1Q8NBF1 620 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 WDR66Q8TBY9 1149 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 GJA10Q969M2 543 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 A0A1W2PPM1 405 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 UBTFL6P0CB48 400 aaPredicted RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 HIRAP54198 1017 aaPredicted RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 ZNF200P98182 395 aaPredicted RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 CNTN2Q02246 1040 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 BST1Q10588 318 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CAVIN4Q5BKX8 364 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ADCY4Q8NFM4 1077 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CMASQ8NFW8 434 aaPredicted RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 RFWD2Q8NHY2 731 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 TRPC4APQ8TEL6 797 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ATG4AQ8WYN0 398 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 UNKQ9C0B0 810 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 HERC5Q9UII4 1024 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 B3GNT3Q9Y2A9 372 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 BAIAP3O94812 1187 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 SERPINB2P05120 415 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 RALAP11233 206 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CCDC130P13994 396 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 PRKCHP24723 683 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 GABRB3P28472 473 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 TRIP13Q15645 432 aaPredicted RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 MYLK3Q32MK0 819 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 C15orf39Q6ZRI6 1047 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 RHOT1Q8IXI2 618 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 C4orf33Q8N1A6 199 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CATSPER1Q8NEC5 780 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 HELQQ8TDG4 1101 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 DCAKDQ8WVC6 231 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 C17orf50Q8WW18 174 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 NMD3Q96D46 503 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 FAM161BQ96MY7 647 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 RUSC1Q9BVN2 902 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ARMCX1Q9P291 453 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 HESX1Q9UBX0 185 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 HMX2A2RU54 273 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 PPP1R11O60927 126 aaPredicted RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 PROSCO94903 275 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 IL2RBP14784 551 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 MAGEA3P43357 314 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CBX2Q14781 532 aaPredicted RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 TEX44Q53QW1 395 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 C6orf163Q5TEZ5 329 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 SUSD4Q5VX71 490 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 POLNQ7Z5Q5 900 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ZNF677Q86XU0 584 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CHERPQ8IWX8 916 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 RTKN2Q8IZC4 609 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 SLC44A5Q8NCS7 719 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 GSTCDQ8NEC7 633 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ACMSDQ8TDX5 336 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 C1orf54Q8WWF1 131 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 POP1Q99575 1024 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 PNPLA8Q9NP80 782 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ANAPC7Q9UJX3 599 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 PATJQ8NI35 1801 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 DNAH14Q0VDD8 3507 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 E9PMD0 336 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ATP2A1O14983 1001 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ZC3H11AO75152 810 aaKnown RBP eCLIP5.36□□□□□ -1.55
RIF1-203ENST00000428287 LGR5O75473 907 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 GPX6P59796 221 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 MYBPC1Q00872 1141 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CNGA3Q16281 694 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 EFHC1Q5JVL4 640 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 IRAK1BP1Q5VVH5 260 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 PLEKHA7Q6IQ23 1121 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 TRIM72Q6ZMU5 477 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 RBM44Q6ZP01 1051 aaKnown RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 CCDC106Q9BWC9 280 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ZNRF3Q9ULT6 936 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 LZTS1Q9Y250 596 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 RANBP2P49792 3224 aaKnown RBP5.35□□□□□ -1.55
RIF1-203ENST00000428287 SSTR1P30872 391 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 TFDP3Q5H9I0 405 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 DCDC5Q6ZRR9 648 aa5.35□□□□□ -1.55
RIF1-203ENST00000428287 RINLQ6ZS11 566 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms