RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 TTC30AQ86WT1 665 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 SLC44A3Q8N4M1 653 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 PDZD8Q8NEN9 1154 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 SCAMP5Q8TAC9 235 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 OVCA2Q8WZ82 227 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 FBXO32Q969P5 355 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 CBX8Q9HC52 389 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 DNAJC12Q9UKB3 198 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 DUSP12Q9UNI6 340 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 TRIOO75962 3097 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 FAM92AA1XBS5 289 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 KLHDC7AQ5VTJ3 777 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 TXNDC8Q6A555 127 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 TANGO2Q6ICL3 276 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 LCLAT1Q6UWP7 414 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 MAB21L3Q8N8X9 362 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 TFAP2BQ92481 460 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 EDAQ92838 391 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 E2F7Q96AV8 911 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 RPP25Q9BUL9 199 aaKnown RBP26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 SLC46A2Q9BY10 475 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 FBXO44Q9H4M3 255 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 PLCB1Q9NQ66 1216 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 AJAP1Q9UKB5 411 aaPredicted RBP26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 NCANO14594 1321 aa26.57■■□□□ 1.84
HERPUD2-205ENST00000427455 BRD2P25440 801 aaKnown RBP26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 BST2Q10589 180 aaKnown RBP26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 GPRIN1Q7Z2K8 1008 aa26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 ARID3BQ8IVW6 561 aaPredicted RBP26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 CMTM8Q8IZV2 173 aa26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 UBXN6Q9BZV1 441 aa26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 SMOC2Q9H3U7 446 aa26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 TRPC7Q9HCX4 862 aa26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 ANAPC1Q9H1A4 1944 aa26.56■■□□□ 1.84
HERPUD2-205ENST00000427455 MYO16Q9Y6X6 1858 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 ZNF840PA6NDX5 716 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 SETSIPP0DME0 302 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 SRFP11831 508 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 UCHL3P15374 230 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 AVPR1AP37288 418 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 TPM4P67936 248 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 UBXN1Q04323 297 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 CNGA2Q16280 664 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 LUZP1Q86V48 1076 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 ZSWIM1Q9BR11 485 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 EPHX3Q9H6B9 360 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 FHOD1Q9Y613 1164 aa26.55■■□□□ 1.84
HERPUD2-205ENST00000427455 TRAV19A0A0A6YYK7 116 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 XPO1O14980 1071 aaKnown RBP26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 PRAMEF12O95522 483 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 PFKLP17858 780 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 USP8P40818 1118 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 VIPR2P41587 438 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 PDE6CP51160 858 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 PDE4CQ08493 712 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 PKDCCQ504Y2 493 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 PIGZQ86VD9 579 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 NAA15Q9BXJ9 866 aaKnown RBP26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 OBP2AQ9NY56 170 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 SIK3Q9Y2K2 1263 aa26.54■■□□□ 1.84
HERPUD2-205ENST00000427455 NARSO43776 548 aaKnown RBP26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 CALCAP01258 141 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 GNA15P30679 374 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 KIF11P52732 1056 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 SIGLEC14Q08ET2 396 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 RAPGEF1Q13905 1077 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 SYCP1Q15431 976 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 DEPDC1BQ8WUY9 529 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 ERGIC2Q96RQ1 377 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 PLA2G2FQ9BZM2 168 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 GANQ9H2C0 597 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 GMIPQ9P107 970 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 SCML2Q9UQR0 700 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 DAAM1Q9Y4D1 1078 aa26.53■■□□□ 1.84
HERPUD2-205ENST00000427455 C2orf78A6NCI8 922 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 HEPACAM2A8MVW5 462 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 M0QYV0 167 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 DPYSL4O14531 572 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 MED7O43513 233 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 CKMP06732 381 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 PLA2G4AP47712 749 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 KLK7P49862 253 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 MEA1Q16626 185 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 SNX30Q5VWJ9 437 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 VITQ6UXI7 678 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 UBA3Q8TBC4 463 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 RSPRY1Q96DX4 576 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 KIF9Q9HAQ2 790 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 SLC2A4RGQ9NR83 387 aa26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 FAM207AQ9NSI2 230 aaPredicted RBP26.52■■□□□ 1.84
HERPUD2-205ENST00000427455 GOLGA6L19H0YKK7 550 aa26.51■■□□□ 1.83
HERPUD2-205ENST00000427455 FOXN3O00409 490 aaPredicted RBP26.51■■□□□ 1.83
HERPUD2-205ENST00000427455 THAP12O43422 761 aa26.51■■□□□ 1.83
HERPUD2-205ENST00000427455 ABL1P00519 1130 aa26.51■■□□□ 1.83
HERPUD2-205ENST00000427455 USP17L7P0C7H9 530 aa26.51■■□□□ 1.83
HERPUD2-205ENST00000427455 ZDHHC11BP0C7U3 371 aa26.51■■□□□ 1.83
HERPUD2-205ENST00000427455 PSMC3P17980 439 aa26.51■■□□□ 1.83
HERPUD2-205ENST00000427455 ZNF268Q14587 947 aaPredicted RBP26.51■■□□□ 1.83
HERPUD2-205ENST00000427455 DRAP1Q14919 205 aaPredicted RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms