RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TOM1L1O75674 476 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 HAUS5O94927 633 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 NFICP08651 508 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 GMPSP49915 693 aaPredicted RBP15.02□□□□□ -0.01
ERCC3-202ENST00000426778 SLC8A3P57103 927 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 RCN2Q14257 317 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 SGSM1Q2NKQ1 1148 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 HSDL1Q3SXM5 330 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 LRRC38Q5VT99 294 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 FAF2Q96CS3 445 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 ACO2Q99798 780 aaKnown RBP15.02□□□□□ -0.01
ERCC3-202ENST00000426778 USP18Q9UMW8 372 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 TRIP11Q15643 1979 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 BRCA2P51587 3418 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 MCF2LO15068 1137 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 INHBAP08476 426 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 PTPN4P29074 926 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 CLCN3P51790 818 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 RCN1Q15293 331 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 PARP6Q2NL67 630 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 ZC3H12AQ5D1E8 599 aaKnown RBP15.01□□□□□ -0.01
ERCC3-202ENST00000426778 CAPRIN2Q6IMN6 1127 aaKnown RBP15.01□□□□□ -0.01
ERCC3-202ENST00000426778 TRNP1Q6NT89 227 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 ZCCHC23Q6ZST2 131 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 BBS12Q6ZW61 710 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 XYLT1Q86Y38 959 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 CDHR1Q96JP9 859 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 CLPTM1LQ96KA5 538 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 ACAP3Q96P50 834 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 MRPL4Q9BYD3 311 aaKnown RBP15.01□□□□□ -0.01
ERCC3-202ENST00000426778 KCNK13Q9HB14 408 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 SLC17A6Q9P2U8 582 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 TRIM49D1C9J1S8 452 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 FARP2O94887 1054 aaPredicted RBP15.01□□□□□ -0.01
ERCC3-202ENST00000426778 PIGRP01833 764 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 ITGB3P05106 788 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 PGK2P07205 417 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 TNFAIP1Q13829 316 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 HADHQ16836 314 aaKnown RBP15.01□□□□□ -0.01
ERCC3-202ENST00000426778 SLC45A4Q5BKX6 768 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 CES4AQ5XG92 561 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 C12orf29Q8N999 325 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 ARMC2Q8NEN0 867 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 SHKBP1Q8TBC3 707 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 TRIM55Q9BYV6 548 aa15.01□□□□□ -0.01
ERCC3-202ENST00000426778 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.01□□□□□ -0.01
ERCC3-202ENST00000426778 PSME4Q14997 1843 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 E2F8A0AVK6 867 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 SIGLEC16A6NMB1 481 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 GYG2O15488 501 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 KCNN4O15554 427 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 SMNDC1O75940 238 aaKnown RBP eCLIP15□□□□□ -0.01
ERCC3-202ENST00000426778 ATG7O95352 703 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 ARIH2O95376 493 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 IQCF3P0C7M6 154 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 CCDC6Q16204 474 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 ANGEL2Q5VTE6 544 aaKnown RBP15□□□□□ -0.01
ERCC3-202ENST00000426778 ANO7Q6IWH7 933 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 XRRA1Q6P2D8 792 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 RGS9BPQ6ZS82 235 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 CEP128Q6ZU80 1094 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 UCMAQ8WVF2 138 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 COPS5Q92905 334 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 NMUR2Q9GZQ4 415 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 OGTO15294 1046 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 LSM8O95777 96 aaKnown RBP15□□□□□ -0.01
ERCC3-202ENST00000426778 APRTP07741 180 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 F7P08709 466 aaPredicted RBP15□□□□□ -0.01
ERCC3-202ENST00000426778 EIF4BP23588 611 aaKnown RBP15□□□□□ -0.01
ERCC3-202ENST00000426778 GMPRP36959 345 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 ACSBG2Q5FVE4 666 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 TREML2Q5T2D2 321 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 C4orf50Q6ZRC1 276 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 NCAPG2Q86XI2 1143 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 UNC5BQ8IZJ1 945 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 VPS52Q8N1B4 723 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 INPP5DQ92835 1189 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 LPIN3Q9BQK8 851 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 ELOVL4Q9GZR5 314 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 SIX4Q9UIU6 781 aa15□□□□□ -0.01
ERCC3-202ENST00000426778 CPSF3Q9UKF6 684 aaKnown RBP15□□□□□ -0.01
ERCC3-202ENST00000426778 MICAL2O94851 1124 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 ENO1P06733 434 aaKnown RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 KRT7P08729 469 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 ZNF200P98182 395 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 KDSRQ06136 332 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 MUM1Q2TAK8 710 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 KLHL38Q2WGJ6 581 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 PPP6R3Q5H9R7 873 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 CCDC110Q8TBZ0 833 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 MCUR1Q96AQ8 359 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 HEXIM2Q96MH2 286 aaKnown RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 CYTH2Q99418 400 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 ADPGKQ9BRR6 497 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 NGRNQ9NPE2 291 aaKnown RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 RGPD3A6NKT7 1758 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-202ENST00000426778 RGPD4Q7Z3J3 1758 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 DPPA5A6NC42 116 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 SPDYE5A6NIY4 337 aa14.99□□□□□ -0.01
ERCC3-202ENST00000426778 ATP5HO75947 161 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms