RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 FAM200BP0CF97 657 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 PCSK1P29120 753 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 CARSP49589 748 aaKnown RBP18.22■□□□□ 0.51
FN1-208ENST00000426059 SNX1Q13596 522 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 BEND6Q5SZJ8 279 aaPredicted RBP18.22■□□□□ 0.51
FN1-208ENST00000426059 DDX42Q86XP3 938 aaKnown RBP eCLIP18.22■□□□□ 0.51
FN1-208ENST00000426059 MYLPFQ96A32 169 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 PLVAPQ9BX97 442 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 KANSL3Q9P2N6 904 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 R3HDM2Q9Y2K5 976 aaKnown RBP18.22■□□□□ 0.51
FN1-208ENST00000426059 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.22■□□□□ 0.51
FN1-208ENST00000426059 LRRD1A4D1F6 860 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 FSCN2O14926 492 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 RNF8O76064 485 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 GJA8P48165 433 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 PLCB3Q01970 1234 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 GPRIN1Q7Z2K8 1008 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 ZMIZ2Q8NF64 920 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 EXD1Q8NHP7 514 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 APBB2Q92870 758 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 TOX2Q96NM4 488 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 SLITRK1Q96PX8 696 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 PEBP4Q96S96 227 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 ADAM33Q9BZ11 813 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 OSBPL8Q9BZF1 889 aa18.22■□□□□ 0.51
FN1-208ENST00000426059 ELAC1Q9H777 363 aaKnown RBP18.22■□□□□ 0.51
FN1-208ENST00000426059 NRP1O14786 923 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 CXCL10P02778 98 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 BDNFP23560 247 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 ITGB8P26012 769 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 SLC8A3P57103 927 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 TMCO2Q7Z6W1 182 aaPredicted RBP18.21■□□□□ 0.51
FN1-208ENST00000426059 CRIPAKQ8N1N5 446 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 CASKIN2Q8WXE0 1202 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 HSPH1Q92598 858 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 VWCEQ96DN2 955 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 HSFY1Q96LI6 401 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 ACBD6Q9BR61 282 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 TRIM31Q9BZY9 425 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
FN1-208ENST00000426059 CHST7Q9NS84 486 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 ASNSD1Q9NWL6 643 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 TBX21Q9UL17 535 aa18.21■□□□□ 0.51
FN1-208ENST00000426059 TBKBP1A7MCY6 615 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 PHF2O75151 1096 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 TADA2AO75478 443 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 SASH3O75995 380 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 CD48P09326 243 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 RPL34P49207 117 aaKnown RBP18.2■□□□□ 0.5
FN1-208ENST00000426059 ATXN1P54253 815 aaKnown RBP18.2■□□□□ 0.5
FN1-208ENST00000426059 YWHAHQ04917 246 aaPredicted RBP18.2■□□□□ 0.5
FN1-208ENST00000426059 ODF2Q5BJF6 829 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 INTS6LQ5JSJ4 861 aaKnown RBP18.2■□□□□ 0.5
FN1-208ENST00000426059 SCYL2Q6P3W7 929 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 CEP57Q86XR8 500 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 CNPY3Q9BT09 278 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 USP18Q9UMW8 372 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 ERLIN1O75477 346 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 CCDC137Q6PK04 289 aaKnown RBP18.2■□□□□ 0.5
FN1-208ENST00000426059 FAM172AQ8WUF8 416 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 FAM149B1Q96BN6 582 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 ARMC5Q96C12 935 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 SLITRK6Q9H5Y7 841 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 LRRC4Q9HBW1 653 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 MTUS1Q9ULD2 1270 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 NFU1Q9UMS0 254 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 MICAL3Q7RTP6 2002 aa18.2■□□□□ 0.5
FN1-208ENST00000426059 VWA8A3KMH1 1905 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 ACADSBP45954 432 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 TKTL1P51854 596 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 DR1Q01658 176 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 ADCY1Q08828 1119 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 LRRC38Q5VT99 294 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 FAM171BQ6P995 826 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 RCOR2Q8IZ40 523 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 CCDC26Q8TAB7 109 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 HNRNPLLQ8WVV9 542 aaKnown RBP18.19■□□□□ 0.5
FN1-208ENST00000426059 DPH5Q9H2P9 285 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 PRDM5Q9NQX1 630 aaPredicted RBP18.19■□□□□ 0.5
FN1-208ENST00000426059 GDF3Q9NR23 364 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 LCMT1Q9UIC8 334 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 DSEQ9UL01 958 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 TRUB2O95900 331 aaKnown RBP18.19■□□□□ 0.5
FN1-208ENST00000426059 SDC4P31431 198 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 SLC11A1P49279 550 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 SNX16P57768 344 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 KLF1Q13351 362 aaPredicted RBP18.19■□□□□ 0.5
FN1-208ENST00000426059 CLUL1Q15846 466 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 HADHQ16836 314 aaKnown RBP18.19■□□□□ 0.5
FN1-208ENST00000426059 SPOCD1Q6ZMY3 1216 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 HFE2Q6ZVN8 426 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 SLC26A9Q7LBE3 791 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 TMEM173Q86WV6 379 aaPredicted RBP18.19■□□□□ 0.5
FN1-208ENST00000426059 NPAS4Q8IUM7 802 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 THEM5Q8N1Q8 247 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 PKMYT1Q99640 499 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 GPR62Q9BZJ7 368 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 C11orf49Q9H6J7 331 aa18.19■□□□□ 0.5
FN1-208ENST00000426059 PCDHB8Q9UN66 801 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms