RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 CLEC1BQ9P126 229 aa7.5□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CDV3Q9UKY7 258 aaKnown RBP7.5□□□□□ -1.21
CHCHD3P1-201ENST00000425516 KIAA1257Q9ULG3 409 aa7.5□□□□□ -1.21
CHCHD3P1-201ENST00000425516 MYO6Q9UM54 1294 aa7.5□□□□□ -1.21
CHCHD3P1-201ENST00000425516 PCDHB5Q9Y5E4 795 aa7.5□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ITIH6Q6UXX5 1313 aa7.5□□□□□ -1.21
CHCHD3P1-201ENST00000425516 A0A1W2PQJ5 194 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 FIGNL2A6NMB9 653 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 O00370 1275 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CYP26A1O43174 497 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 TBX10O75333 385 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 BEST1O76090 585 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CLSTN1O94985 981 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 GYPCP04921 128 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 HAPLN1P10915 354 aaPredicted RBP7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 VDRP11473 427 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CCDC130P13994 396 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 BDNFP23560 247 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CYP2F1P24903 491 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 HOXA9P31269 272 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SOX5P35711 763 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CTSOP43234 321 aaPredicted RBP7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 MAGEA11P43364 429 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CDR1P51861 262 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 NR1H3Q13133 447 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CNGA2Q16280 664 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 LLGL2Q6P1M3 1020 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SYCE2Q6PIF2 218 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 VSTM1Q6UX27 236 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 C4orf50Q6ZRC1 276 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 IRF2BP2Q7Z5L9 587 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 FAM35AQ86V20 835 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ZMIZ2Q8NF64 920 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 OLIG1Q8TAK6 271 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SLC2A14Q8TDB8 520 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 DDX1Q92499 740 aaKnown RBP7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CASP10Q92851 521 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ZNF707Q96C28 371 aaPredicted RBP7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 PABPC5Q96DU9 382 aaKnown RBP7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 MRFAP1L1Q96HT8 127 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 PGLYRP2Q96PD5 576 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SMOQ99835 787 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 NUP58Q9BVL2 599 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 RHOBTB2Q9BYZ6 727 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 TRIM5Q9C035 493 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ZNF518BQ9C0D4 1074 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 S1PR5Q9H228 398 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ZNF395Q9H8N7 513 aaPredicted RBP7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CYP4F11Q9HBI6 524 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CSNK1G1Q9HCP0 422 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 MAN1C1Q9NR34 630 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ABI2Q9NYB9 513 aaPredicted RBP7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 AIPL1Q9NZN9 384 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CAPN11Q9UMQ6 739 aa7.49□□□□□ -1.21
CHCHD3P1-201ENST00000425516 PRUNE2Q8WUY3 3088 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 XIRP2A4UGR9 3374 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 HHLA1C9JL84 531 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 TNFRSF10BO14763 440 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 RFPL2O75678 378 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SOAT2O75908 522 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 GFPT2O94808 682 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 TPM3P06753 285 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 C8AP07357 584 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 POU2F2P09086 479 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 KRT5P13647 590 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 HOXB8P17481 243 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ATF6P18850 670 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 TRIM21P19474 475 aaKnown RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 BRD2P25440 801 aaKnown RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ELF1P32519 619 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SCTRP47872 440 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 TUFMP49411 452 aaKnown RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ZBED6P86452 979 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CYP27A1Q02318 531 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 RAPGEF1Q13905 1077 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CCDC85BQ15834 202 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 MEA1Q16626 185 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 DDR2Q16832 855 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SGO2Q562F6 1265 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 E4F1Q66K89 784 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SPECC1LQ69YQ0 1117 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ANKRD54Q6NXT1 300 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 LCLAT1Q6UWP7 414 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CLEC20AQ6ZU45 233 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CCDC149Q6ZUS6 474 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 NOP9Q86U38 636 aaKnown RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SLC47A2Q86VL8 602 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 TTC30AQ86WT1 665 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SPATA2LQ8IUW3 424 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 MICALL1Q8N3F8 863 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 C12orf76Q8N812 135 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ANKRD52Q8NB46 1076 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CMASQ8NFW8 434 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 SLC7A14Q8TBB6 771 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 ZNF606Q8WXB4 792 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 IQCDQ96DY2 449 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 C8orf48Q96LL4 319 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 CEP295NLQ96MC4 621 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 KCNK16Q96T55 309 aa7.48□□□□□ -1.21
CHCHD3P1-201ENST00000425516 INSM2Q96T92 566 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms