RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 APOL5Q9BWW9 433 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 CRTAC1Q9NQ79 661 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 MAN1C1Q9NR34 630 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 NOCTQ9UK39 431 aaKnown RBP16.51■□□□□ 0.23
SHOX2-202ENST00000425436 CDH9Q9ULB4 789 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 SLC27A5Q9Y2P5 690 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 FTLP02792 175 aaPredicted RBP16.5■□□□□ 0.23
SHOX2-202ENST00000425436 ATF2P15336 505 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 PTPN1P18031 435 aaKnown RBP16.5■□□□□ 0.23
SHOX2-202ENST00000425436 DUSP4Q13115 394 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 DCP1BQ8IZD4 617 aaKnown RBP16.5■□□□□ 0.23
SHOX2-202ENST00000425436 MMGT1Q8N4V1 131 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 SLC35G2Q8TBE7 412 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 FEZF2Q8TBJ5 459 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 WHAMMQ8TF30 809 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 PABPC5Q96DU9 382 aaKnown RBP16.5■□□□□ 0.23
SHOX2-202ENST00000425436 CAPZA3Q96KX2 299 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 PKMYT1Q99640 499 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 ELOVL4Q9GZR5 314 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 CRISPLD1Q9H336 500 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 ARFGAP3Q9NP61 516 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 PRDM6Q9NQX0 595 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 C5orf42Q9H799 3197 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 BRWD1Q9NSI6 2320 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 MTMR11A4FU01 709 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 SPDYE4A6NLX3 237 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 NCK2O43639 380 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 TBX10O75333 385 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 CILPO75339 1184 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 RFPL2O75678 378 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 CLCN6P51797 869 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 INCA1Q0VD86 236 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 GLE1Q53GS7 698 aaKnown RBP16.5■□□□□ 0.23
SHOX2-202ENST00000425436 MDH1BQ5I0G3 518 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 TPGS2Q68CL5 300 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 WDR93Q6P2C0 686 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 FAM171BQ6P995 826 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 TRIM72Q6ZMU5 477 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 PEX26Q7Z412 305 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 NOP9Q86U38 636 aaKnown RBP16.5■□□□□ 0.23
SHOX2-202ENST00000425436 TTC9BQ8N6N2 239 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 C12orf29Q8N999 325 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 CASP10Q92851 521 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 TRIM11Q96F44 468 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 CYP4F11Q9HBI6 524 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 AFF4Q9UHB7 1163 aaKnown RBP16.5■□□□□ 0.23
SHOX2-202ENST00000425436 FBXW11Q9UKB1 542 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 AMFRQ9UKV5 643 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 CNTN6Q9UQ52 1028 aa16.5■□□□□ 0.23
SHOX2-202ENST00000425436 PRRG1O14668 218 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 SOAT2O75908 522 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 FTCDO95954 541 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 KRT5P13647 590 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 ACO1P21399 889 aaKnown RBP16.49■□□□□ 0.23
SHOX2-202ENST00000425436 ELF1P32519 619 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 COL19A1Q14993 1142 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 TMEM184AQ6ZMB5 413 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 DAAM2Q86T65 1068 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 SLC47A2Q86VL8 602 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 UNC93AQ86WB7 457 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 UBR7Q8N806 425 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 B3GALNT2Q8NCR0 500 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 SPATA4Q8NEY3 305 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 SLC7A14Q8TBB6 771 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 MYCBPAPQ8TBZ2 947 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 SLC20A1Q8WUM9 679 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 NT5C1AQ9BXI3 368 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 RHOBTB2Q9BYZ6 727 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 ANKZF1Q9H8Y5 726 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 ABI2Q9NYB9 513 aaPredicted RBP16.49■□□□□ 0.23
SHOX2-202ENST00000425436 PCDHB4Q9Y5E5 795 aa16.49■□□□□ 0.23
SHOX2-202ENST00000425436 TMCO5BA8MYB1 307 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
SHOX2-202ENST00000425436 CLDN5O00501 218 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 ZNF185O15231 689 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 MTA2O94776 668 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 CALCAP01258 141 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 MYBL1P10243 752 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 CHRNB2P17787 502 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 KCNA5P22460 613 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 RAD23BP54727 409 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 YWHAEP62258 255 aaKnown RBP16.48■□□□□ 0.23
SHOX2-202ENST00000425436 FMO1Q01740 532 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 ACAD10Q6JQN1 1059 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 ANKRD54Q6NXT1 300 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 TMEM270Q6UE05 265 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 CRYBG2Q8N1P7 616 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 COG1Q8WTW3 980 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 HLA-CQ95604 372 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 MYLPFQ96A32 169 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 PCED1BQ96HM7 432 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 TNIP3Q96KP6 325 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 HEXIM2Q96MH2 286 aaKnown RBP16.48■□□□□ 0.23
SHOX2-202ENST00000425436 PLEKHA4Q9H4M7 779 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 UBE2ZQ9H832 354 aaPredicted RBP16.48■□□□□ 0.23
SHOX2-202ENST00000425436 ABCB6Q9NP58 842 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 FAM49BQ9NUQ9 324 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 UVRAGQ9P2Y5 699 aa16.48■□□□□ 0.23
SHOX2-202ENST00000425436 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms