RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 SRRM3A6NNA2 597 aaPredicted RBP17.22■□□□□ 0.35
PUDP-203ENST00000424830 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.22■□□□□ 0.35
PUDP-203ENST00000424830 ATP2C2O75185 946 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 KLF8O95600 359 aaPredicted RBP17.22■□□□□ 0.35
PUDP-203ENST00000424830 ENGP17813 658 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 TIE1P35590 1138 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 PTGER3P43115 390 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 USP46P62068 366 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 ALCAMQ13740 583 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 RABEP1Q15276 862 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
PUDP-203ENST00000424830 LYSMD4Q5XG99 296 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 BRAPQ7Z569 592 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 ADGRG2Q8IZP9 1017 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 IL17RCQ8NAC3 791 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 KBTBD7Q8WVZ9 684 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 HMGB4Q8WW32 186 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 HPDLQ96IR7 371 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 TMX3Q96JJ7 454 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 FAM84AQ96KN4 292 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 FNBP1Q96RU3 617 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 PDE11AQ9HCR9 933 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 OLFML3Q9NRN5 406 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 SMPD4Q9NXE4 827 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 FASNP49327 2511 aaKnown RBP17.22■□□□□ 0.35
PUDP-203ENST00000424830 PCNX2A6NKB5 2137 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 ZNF840PA6NDX5 716 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 ANTXRLA6NF34 631 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 SGK1O00141 431 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 ABL1P00519 1130 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 TNNC2P02585 160 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 HNRNPLP14866 589 aaKnown RBP eCLIP17.21■□□□□ 0.35
PUDP-203ENST00000424830 LMO2P25791 158 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 HOXD12P35452 270 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 TXLNAP40222 546 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 GRIA2P42262 883 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 ATXN3P54252 364 aaPredicted RBP17.21■□□□□ 0.35
PUDP-203ENST00000424830 NOP14P78316 857 aaKnown RBP17.21■□□□□ 0.35
PUDP-203ENST00000424830 SCARA3Q6AZY7 606 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 SLC23A3Q6PIS1 610 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 SV2BQ7L1I2 683 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 DDX42Q86XP3 938 aaKnown RBP eCLIP17.21■□□□□ 0.35
PUDP-203ENST00000424830 PGBD3Q8N328 593 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 HDDC3Q8N4P3 179 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 EPSTI1Q96J88 318 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 CBWD1Q9BRT8 395 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 TTLL2Q9BWV7 592 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 PCIF1Q9H4Z3 704 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 CRTAC1Q9NQ79 661 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 ARHGEF4Q9NR80 690 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 TMEM74BQ9NUR3 256 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 CFAP97Q9P2B7 532 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 SMC3Q9UQE7 1217 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 ITPR1Q14643 2758 aa17.21■□□□□ 0.35
PUDP-203ENST00000424830 TCRBV21S2A2A0A5A6 115 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 HYAL3O43820 417 aaPredicted RBP17.21■□□□□ 0.34
PUDP-203ENST00000424830 OLFM2O95897 454 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 CFIP05156 583 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 PDGFRBP09619 1106 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 ADH5P11766 374 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 IDEP14735 1019 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 RDXP35241 583 aaKnown RBP17.21■□□□□ 0.34
PUDP-203ENST00000424830 SLC6A11P48066 632 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 SIM1P81133 766 aaPredicted RBP17.21■□□□□ 0.34
PUDP-203ENST00000424830 KDSRQ06136 332 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 SURF1Q15526 300 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 RRAGBQ5VZM2 374 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.34
PUDP-203ENST00000424830 SFTPA1Q8IWL2 248 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 GPD1LQ8N335 351 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 MYCBPAPQ8TBZ2 947 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 PCED1BQ96HM7 432 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 SLITRK1Q96PX8 696 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 MMS19Q96T76 1030 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 RNF38Q9H0F5 515 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 INTS13Q9NVM9 706 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 TBC1D14Q9P2M4 693 aa17.21■□□□□ 0.34
PUDP-203ENST00000424830 ATXN2Q99700 1313 aaKnown RBP17.2■□□□□ 0.34
PUDP-203ENST00000424830 FREM2Q5SZK8 3169 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 MYOFQ9NZM1 2061 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 F8VP50 259 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 SCAMP3O14828 347 aaKnown RBP17.2■□□□□ 0.34
PUDP-203ENST00000424830 KIAA0391O15091 583 aaKnown RBP17.2■□□□□ 0.34
PUDP-203ENST00000424830 AP5Z1O43299 807 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 MBL2P11226 248 aaPredicted RBP17.2■□□□□ 0.34
PUDP-203ENST00000424830 WARSP23381 471 aaKnown RBP17.2■□□□□ 0.34
PUDP-203ENST00000424830 TNFRSF4P43489 277 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 CASP5P51878 434 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 ACAP1Q15027 740 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 MAP7D1Q3KQU3 841 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 TDRD10Q5VZ19 366 aaKnown RBP17.2■□□□□ 0.34
PUDP-203ENST00000424830 USP49Q70CQ1 688 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 HS2ST1Q7LGA3 356 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 TRMT11Q7Z4G4 463 aaKnown RBP17.2■□□□□ 0.34
PUDP-203ENST00000424830 LIMS2Q7Z4I7 341 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 FRMD1Q8N878 549 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 CEP76Q8TAP6 659 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 DNAJC19Q96DA6 116 aa17.2■□□□□ 0.34
PUDP-203ENST00000424830 MBD1Q9UIS9 605 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms