RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 IKZF4Q9H2S9 585 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 FSCN3Q9NQT6 498 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 MAGEC2Q9UBF1 373 aaPredicted RBP17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 SNX9Q9Y5X1 595 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 HELZP42694 1942 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 LOC400499M0QZD8 3231 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 ATXN2Q99700 1313 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 HCRTO43612 131 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 TBCAO75347 108 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 UBA7P41226 1012 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 USP46P62068 366 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 SLC14A1Q13336 389 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 SLC36A4Q6YBV0 504 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 DENND5BQ6ZUT9 1274 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 C12orf40Q86WS4 652 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 BRSK2Q8IWQ3 736 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 ADGRF2Q8IZF7 708 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 CSGALNACT2Q8N6G5 542 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 HVCN1Q96D96 273 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 GTPBP2Q9BX10 602 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 ARHGEF4Q9NR80 690 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 DNAAF2Q9NVR5 837 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 EHD2Q9NZN4 543 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 ITGA11Q9UKX5 1188 aa17.9■□□□□ 0.46
CHCHD3-202ENST00000423635 TCRBV21S2A2A0A5A6 115 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 ARHGAP33O14559 1287 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 ATP2C2O75185 946 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 PPP1R37O75864 691 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 PLCG1P19174 1290 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 RBP5P82980 135 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 ZNF33AQ06730 810 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 SCAPQ12770 1279 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 RESTQ13127 1097 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 PGBD3Q8N328 593 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 PHTF2Q8N3S3 785 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 MINDY1Q8N5J2 469 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 FAM213AQ9BRX8 229 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 CDH9Q9ULB4 789 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 CPQQ9Y646 472 aa17.89■□□□□ 0.45
CHCHD3-202ENST00000423635 MYO18AQ92614 2054 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 ADH1CP00326 375 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 LDHAP00338 332 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 OAS1P00973 400 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 BDNFP23560 247 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 LMO2P25791 158 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 DDIT3P35638 169 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 GRIK1P39086 918 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 NOP14P78316 857 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 RPL6Q02878 288 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 TRIP6Q15654 476 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 MAPRE1Q15691 268 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 MCTP1Q6DN14 999 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 PDZD3Q86UT5 571 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 ADAMTS14Q8WXS8 1223 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 CRTAC1Q9NQ79 661 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 TBC1D14Q9P2M4 693 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 SIX4Q9UIU6 781 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 PCDH15Q96QU1 1955 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 ADAMTS9Q9P2N4 1935 aa17.88■□□□□ 0.45
CHCHD3-202ENST00000423635 GJB3O75712 270 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 SYPP08247 313 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 ADH5P11766 374 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 C19orf48Q6RUI8 117 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 TRMT11Q7Z4G4 463 aaKnown RBP17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 DDX42Q86XP3 938 aaKnown RBP eCLIP17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 KRI1Q8N9T8 703 aaKnown RBP17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 ZSWIM2Q8NEG5 633 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 KBTBD7Q8WVZ9 684 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 LARP4BQ92615 738 aaKnown RBP17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 MYLPFQ96A32 169 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 SYT15Q9BQS2 421 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 ZDHHC4Q9NPG8 344 aa17.87■□□□□ 0.45
CHCHD3-202ENST00000423635 MYOFQ9NZM1 2061 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 A0A1W2PQD8 194 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 TRIM66O15016 1216 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 KRT19P08727 400 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 GABRG2P18507 467 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 ANXA13P27216 316 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 GAD2Q05329 585 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 KCNA1Q09470 495 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 CCNI2Q6ZMN8 369 aaPredicted RBP17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 ETFBKMTQ8IXQ9 262 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 DEFB119Q8N690 84 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 OTUB2Q96DC9 234 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 C8orf48Q96LL4 319 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 RBAKQ9NYW8 714 aaPredicted RBP17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 CFAP97Q9P2B7 532 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 EXOC7Q9UPT5 735 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 STARD13Q9Y3M8 1113 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 CEP192Q8TEP8 1941 aa17.86■□□□□ 0.45
CHCHD3-202ENST00000423635 IGHV1OR15-9A0A0B4J2B8 117 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 E2F8A0AVK6 867 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 TBC1D3BA6NDS4 549 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 SH3BP5O60239 455 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 ZNF217O75362 1048 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 GARTP22102 1010 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 LONP1P36776 959 aaKnown RBP17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 PSMC1P62191 440 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms