RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 OR52N2Q8NGI0 321 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 VPS11Q9H270 941 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 BCO1Q9HAY6 547 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 HELLSQ9NRZ9 838 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 FZD1Q9UP38 647 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ACTL7AQ9Y615 435 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SLC4A4Q9Y6R1 1079 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SSC5DA1L4H1 1573 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 KRTAP23-1A1A580 65 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 CXorf49A8MYA2 514 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 NPIPB8E9PQR5 432 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 HIP1O00291 1037 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 PRKAB2O43741 272 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SCAF4O95104 1147 aaKnown RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZRANB2O95218 330 aaKnown RBP eCLIP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 AMY1AP04745 511 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 CETPP11597 493 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 GUCY1A2P33402 732 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SNAPC2Q13487 334 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SBK1Q52WX2 424 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 TATDN1Q6P1N9 297 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZNF572Q7Z3I7 529 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 APBB1IPQ7Z5R6 666 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 CPT1CQ8TCG5 803 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 TFAP2CQ92754 450 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZKSCAN4Q969J2 545 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 OPTNQ96CV9 577 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 CCDC136Q96JN2 1154 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZNF747Q9BV97 191 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 TEX101Q9BY14 249 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 NACAP1Q9BZK3 213 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZCCHC17Q9NP64 241 aaKnown RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 RNF186Q9NXI6 227 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 MCM9Q9NXL9 1143 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SAGE1Q9NXZ1 904 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SWAP70Q9UH65 585 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SLC23A1Q9UHI7 598 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 TCEAL9Q9UHQ7 104 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SAP30BPQ9UHR5 308 aaKnown RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 MYRFQ9Y2G1 1151 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 LUC7L2Q9Y383 392 aaKnown RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 MYH2Q9UKX2 1941 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZNF185O15231 689 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 GPAA1O43292 621 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 GPR32O75388 356 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 GASTP01350 101 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ASNSP08243 561 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 CCND1P24385 295 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 FLT3LGP49771 235 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 FXR1P51114 621 aaKnown RBP eCLIP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 PTH1RQ03431 593 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 GABPAQ06546 454 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 IL10RAQ13651 578 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 TOB2Q14106 344 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ALX1Q15699 326 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 MCMDC2Q4G0Z9 681 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 TTC22Q5TAA0 569 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 C12orf60Q5U649 245 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 CTR9Q6PD62 1173 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZBTB46Q86UZ6 589 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SDR42E1Q8WUS8 393 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 KAT5Q92993 513 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 RILPL2Q969X0 211 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 PAWRQ96IZ0 340 aaKnown RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 CCDC17Q96LX7 622 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 NEU1Q99519 415 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 C7orf25Q9BPX7 421 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 SCAND2PQ9GZW5 306 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZNF768Q9H5H4 540 aaKnown RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 AS3MTQ9HBK9 375 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 LANCL2Q9NS86 450 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ARPP21Q9UBL0 812 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 EIF2B4Q9UI10 523 aaKnown RBP2.91□□□□□ -1.94
VPS13A-208ENST00000423463 ZHX2Q9Y6X8 837 aa2.91□□□□□ -1.94
VPS13A-208ENST00000423463 MYH13Q9UKX3 1938 aa2.9□□□□□ -1.94
VPS13A-208ENST00000423463 CCL15-CCL14A0A0B4J2E2 113 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 CCDC154A6NI56 674 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 TBKBP1A7MCY6 615 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 PRR5-ARHGAP8B1AHC4 643 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 B5MCH6 92 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 C19orf81C9J6K1 198 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 FOXN1O15353 648 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 AKAP10O43572 662 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 ENDOD1O94919 500 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 HSPA8P11142 646 aaKnown RBP2.9□□□□□ -1.95
VPS13A-208ENST00000423463 EDNRBP24530 442 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 PLCD1P51178 756 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 FAM189BP81408 668 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 ZXDAP98168 799 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 PIN1Q13526 163 aaPredicted RBP2.9□□□□□ -1.95
VPS13A-208ENST00000423463 CCL15Q16663 113 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 CERKLQ49MI3 558 aaPredicted RBP2.9□□□□□ -1.95
VPS13A-208ENST00000423463 CCDC181Q5TID7 509 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 FASTKD5Q7L8L6 764 aaKnown RBP2.9□□□□□ -1.95
VPS13A-208ENST00000423463 CATIPQ7Z7H3 387 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 ANKRD23Q86SG2 305 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 TMPRSS6Q8IU80 811 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 RAVER1Q8IY67 606 aaKnown RBP2.9□□□□□ -1.95
VPS13A-208ENST00000423463 OR10H5Q8NGA6 315 aa2.9□□□□□ -1.95
VPS13A-208ENST00000423463 CACTINQ8WUQ7 758 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms