RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 STK4Q13043 487 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 PSMD2Q13200 908 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 CAMKK1Q8N5S9 505 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 KIAA0895Q8NCT3 520 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 NETO1Q8TDF5 533 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 PARD3BQ8TEW8 1205 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 SLITRK1Q96PX8 696 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 HHIPQ96QV1 700 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 B3GNT5Q9BYG0 378 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-206ENST00000423161 DCDC2BA2VCK2 349 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 AP3M2P53677 418 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 SLC7A9P82251 487 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 TAF10Q12962 218 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 KMT5BQ4FZB7 885 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 ZNF667Q5HYK9 610 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 SCARA5Q6ZMJ2 495 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 CACNA2D4Q7Z3S7 1137 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 ACDQ96AP0 544 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 PAGE5Q96GU1 130 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 RNF38Q9H0F5 515 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 VRTNQ9H8Y1 702 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 SMPD4Q9NXE4 827 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 CPQQ9Y646 472 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 ATP8B3O60423 1300 aa19.66■□□□□ 0.74
SREBF1-206ENST00000423161 AXIN1O15169 862 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 OLFM2O95897 454 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 OAS1P00973 400 aaKnown RBP19.65■□□□□ 0.74
SREBF1-206ENST00000423161 PFKFB1P16118 471 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 RAP1GAPP47736 663 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 CDH8P55286 799 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 NCOA4Q13772 614 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 SYT13Q7L8C5 426 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 FAM35AQ86V20 835 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 KBTBD6Q86V97 674 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 NUP93Q8N1F7 819 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 MED10Q9BTT4 135 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 DMAC2Q9NW81 257 aa19.65■□□□□ 0.74
SREBF1-206ENST00000423161 NUP205Q92621 2012 aa19.64■□□□□ 0.74
SREBF1-206ENST00000423161 A0A1B0GVL5 298 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 FOXD2O60548 495 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-206ENST00000423161 AKAP3O75969 853 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 RTN3O95197 1032 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-206ENST00000423161 VNN1O95497 513 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 YWHAQP27348 245 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 OPRD1P41143 372 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 CLDN10P78369 228 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 DMC1Q14565 340 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 FILIP1Q7Z7B0 1213 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 SLC9A9Q8IVB4 645 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 FBXO32Q969P5 355 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 ELMO3Q96BJ8 720 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 LOXL4Q96JB6 756 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 TNIP3Q96KP6 325 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 ARRDC1-AS1Q9H2J1 176 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 KCTD10Q9H3F6 313 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 THADAQ6YHU6 1953 aa19.64■□□□□ 0.73
SREBF1-206ENST00000423161 MYO18AQ92614 2054 aaKnown RBP19.64■□□□□ 0.73
SREBF1-206ENST00000423161 PDXKO00764 312 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 SLC9A3R1O14745 358 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-206ENST00000423161 SCAMP3O14828 347 aaKnown RBP19.63■□□□□ 0.73
SREBF1-206ENST00000423161 SLC30A4O14863 429 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 GDF9O60383 454 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 EPN2O95208 641 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 APBB3O95704 486 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 C4BPAP04003 597 aaKnown RBP19.63■□□□□ 0.73
SREBF1-206ENST00000423161 NR3C1P04150 777 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 CYP17A1P05093 508 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 MBL2P11226 248 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-206ENST00000423161 DLG4P78352 724 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 GAB4Q2WGN9 574 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 DDX42Q86XP3 938 aaKnown RBP eCLIP19.63■□□□□ 0.73
SREBF1-206ENST00000423161 KIAA1958Q8N8K9 716 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 PDZD8Q8NEN9 1154 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 CCDC26Q8TAB7 109 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 OVCA2Q8WZ82 227 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 KCNK16Q96T55 309 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 SDCBP2Q9H190 292 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 CFAP97Q9P2B7 532 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 USP25Q9UHP3 1055 aa19.63■□□□□ 0.73
SREBF1-206ENST00000423161 P4HA1P13674 534 aa19.62■□□□□ 0.73
SREBF1-206ENST00000423161 CMA1P23946 247 aa19.62■□□□□ 0.73
SREBF1-206ENST00000423161 SEC13P55735 322 aa19.62■□□□□ 0.73
SREBF1-206ENST00000423161 CCDC6Q16204 474 aa19.62■□□□□ 0.73
SREBF1-206ENST00000423161 AASDHQ4L235 1098 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-206ENST00000423161 ABCA7Q8IZY2 2146 aa19.62■□□□□ 0.73
SREBF1-206ENST00000423161 TMEM174Q8WUU8 243 aa19.62■□□□□ 0.73
SREBF1-206ENST00000423161 SMARCD1Q96GM5 515 aa19.62■□□□□ 0.73
SREBF1-206ENST00000423161 SPATA32Q96LK8 384 aa19.62■□□□□ 0.73
SREBF1-206ENST00000423161 DMAP1Q9NPF5 467 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-206ENST00000423161 CNOT1A5YKK6 2376 aaKnown RBP19.61■□□□□ 0.73
SREBF1-206ENST00000423161 MYL1P05976 194 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 SLC5A3P53794 718 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 DHCR24Q15392 516 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 SF3A2Q15428 464 aaKnown RBP19.61■□□□□ 0.73
SREBF1-206ENST00000423161 ZACNQ401N2 412 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 CEP135Q66GS9 1140 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 PAQR9Q6ZVX9 377 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 ACOT1Q86TX2 421 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 ADGRG2Q8IZP9 1017 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms