RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 NUP93Q8N1F7 819 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 TC2NQ8N9U0 490 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 OR8K1Q8NGG5 319 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 TRMT2BQ96GJ1 504 aaKnown RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 ZNF512Q96ME7 567 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 TTLL2Q9BWV7 592 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 ABHD10Q9NUJ1 306 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 HCFC1R1Q9NWW0 138 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 DNMT3BQ9UBC3 853 aaKnown RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 CYTH4Q9UIA0 394 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 CDH22Q9UJ99 828 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 DENND4CQ5VZ89 1909 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 LSM8O95777 96 aaKnown RBP17.93■□□□□ 0.46
COL7A1-202ENST00000422991 SERPING1P05155 500 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 SKILP12757 684 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 BMP1P13497 986 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 EPHA5P54756 1037 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 USP46P62068 366 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 RAB41Q5JT25 222 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 CES5AQ6NT32 575 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 PMF1Q6P1K2 205 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 TRIM72Q6ZMU5 477 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 TMC8Q8IU68 726 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 WDTC1Q8N5D0 677 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 C1orf131Q8NDD1 294 aaKnown RBP17.93■□□□□ 0.46
COL7A1-202ENST00000422991 ADAMTS19Q8TE59 1207 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 KCTD13Q8WZ19 329 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 MYRFLQ96LU7 910 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 AGPAT1Q99943 283 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 CORO1BQ9BR76 489 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 LRRC3Q9BY71 257 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 PDCL3Q9H2J4 239 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 HAUS4Q9H6D7 363 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 PIDD1Q9HB75 910 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 ZNF334Q9HCZ1 680 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-202ENST00000422991 IL37Q9NZH6 218 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 CEP83Q9Y592 693 aa17.93■□□□□ 0.46
COL7A1-202ENST00000422991 RTN3O95197 1032 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 RHOP08100 348 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 PTPN2P17706 415 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 RPL34P49207 117 aaKnown RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 RGS7P49802 495 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 KCNQ1P51787 676 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 KIF11P52732 1056 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 NOMO3P69849 1222 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 PDCLQ13371 301 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 SMAD4Q13485 552 aaKnown RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 TAF12Q16514 161 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 TDRD12Q587J7 1177 aaKnown RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 WDR59Q6PJI9 974 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 ZNF571Q7Z3V5 609 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 GRASPQ7Z6J2 395 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 HS6ST3Q8IZP7 471 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 SPC24Q8NBT2 197 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 LEMD2Q8NC56 503 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 TMEM35BQ8NCS4 154 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 SCAMP5Q8TAC9 235 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 STK32AQ8WU08 396 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 PCDHB18PQ96TA0 734 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 AVENQ9NQS1 362 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 ASAH2Q9NR71 780 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 COMMD8Q9NX08 183 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 IMPACTQ9P2X3 320 aa17.92■□□□□ 0.46
COL7A1-202ENST00000422991 MAGED2Q9UNF1 606 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 USP15Q9Y4E8 981 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 BZW2Q9Y6E2 419 aaKnown RBP17.92■□□□□ 0.46
COL7A1-202ENST00000422991 C5orf42Q9H799 3197 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 MUC3AQ02505 3323 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 FAM92AA1XBS5 289 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 GABBR2O75899 941 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 CYP1A1P04798 512 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-202ENST00000422991 PLEKP08567 350 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-202ENST00000422991 MTHFRP42898 656 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 NTHL1P78549 312 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 CLEC16AQ2KHT3 1053 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 LEXMQ3ZCV2 418 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 PABPC1LQ4VXU2 614 aaKnown RBP17.91■□□□□ 0.46
COL7A1-202ENST00000422991 SUSD6Q92537 303 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 HSFY1Q96LI6 401 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 RIPOR3Q96MK2 946 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 SLC4A5Q9BY07 1137 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 IL21Q9HBE4 155 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 CYLDQ9NQC7 956 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 ZNHIT6Q9NWK9 470 aaKnown RBP17.91■□□□□ 0.46
COL7A1-202ENST00000422991 EHD2Q9NZN4 543 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 ARHGAP20Q9P2F6 1191 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 UXTQ9UBK9 157 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-202ENST00000422991 ANAPC1Q9H1A4 1944 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 CLUHO75153 1309 aa17.91■□□□□ 0.46
COL7A1-202ENST00000422991 GRXCR2A6NFK2 248 aa17.9■□□□□ 0.46
COL7A1-202ENST00000422991 YWHAQP27348 245 aa17.9■□□□□ 0.46
COL7A1-202ENST00000422991 CCR2P41597 374 aa17.9■□□□□ 0.46
COL7A1-202ENST00000422991 TKTL1P51854 596 aa17.9■□□□□ 0.46
COL7A1-202ENST00000422991 ADIGQ0VDE8 80 aa17.9■□□□□ 0.46
COL7A1-202ENST00000422991 IFRD2Q12894 506 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-202ENST00000422991 SLC5A9Q2M3M2 681 aa17.9■□□□□ 0.46
COL7A1-202ENST00000422991 TSR1Q2NL82 804 aaKnown RBP17.9■□□□□ 0.46
COL7A1-202ENST00000422991 PRSS36Q5K4E3 855 aa17.9■□□□□ 0.46
COL7A1-202ENST00000422991 ATAT1Q5SQI0 421 aa17.9■□□□□ 0.46
COL7A1-202ENST00000422991 NAA35Q5VZE5 725 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms