RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 CCL26Q9Y258 94 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 DENND4CQ5VZ89 1909 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 AP1G2O75843 785 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 RTN3O95197 1032 aaPredicted RBP23.24■■□□□ 1.31
TRAF4-204ENST00000422344 CCDC130P13994 396 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 TARSP26639 723 aaKnown RBP23.24■■□□□ 1.31
TRAF4-204ENST00000422344 MAGEA9P43362 315 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 INCA1Q0VD86 236 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 ZNF268Q14587 947 aaPredicted RBP23.24■■□□□ 1.31
TRAF4-204ENST00000422344 C1orf228Q6PIY5 440 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 FUKQ8N0W3 1084 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 NUP93Q8N1F7 819 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 SLC2A14Q8TDB8 520 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 C8orf33Q9H7E9 229 aaPredicted RBP23.24■■□□□ 1.31
TRAF4-204ENST00000422344 FAM49BQ9NUQ9 324 aa23.24■■□□□ 1.31
TRAF4-204ENST00000422344 COL4A2P08572 1712 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 C2orf78A6NCI8 922 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 PPP1R3GB7ZBB8 358 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 ABL1P00519 1130 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 HDCP19113 662 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 YWHAQP27348 245 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 MLLT6P55198 1093 aaPredicted RBP23.23■■□□□ 1.31
TRAF4-204ENST00000422344 CAMK4Q16566 473 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 TTC39CQ8N584 583 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 ARL14EPQ8N8R7 260 aaPredicted RBP23.23■■□□□ 1.31
TRAF4-204ENST00000422344 TRIML1Q8N9V2 468 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 TTC8Q8TAM2 541 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 ATRIPQ8WXE1 791 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 SEMA4DQ92854 862 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 FAXDC2Q96IV6 333 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 CYP2S1Q96SQ9 504 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 KCNK16Q96T55 309 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 TMEM30AQ9NV96 361 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 DLL3Q9NYJ7 618 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 NCDNQ9UBB6 729 aa23.23■■□□□ 1.31
TRAF4-204ENST00000422344 PFKLP17858 780 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 BMP6P22004 513 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 ADORA2BP29275 332 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 TAF10Q12962 218 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 PAK1Q13153 545 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 PAQR9Q6ZVX9 377 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 FILIP1Q7Z7B0 1213 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 C12orf29Q8N999 325 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 PDZD8Q8NEN9 1154 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 FBXO32Q969P5 355 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 GKN1Q9NS71 199 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 GTSE1Q9NYZ3 720 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 PCDHGA2Q9Y5H1 932 aa23.22■■□□□ 1.31
TRAF4-204ENST00000422344 GREB1Q4ZG55 1949 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 ZNF638Q14966 1978 aaKnown RBP23.21■■□□□ 1.31
TRAF4-204ENST00000422344 ZNF840PA6NDX5 716 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 CILPO75339 1184 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 FAM200BP0CF97 657 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 RSPO4Q2I0M5 234 aaPredicted RBP23.21■■□□□ 1.31
TRAF4-204ENST00000422344 ITPRIPL2Q3MIP1 535 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 CBWD6Q4V339 395 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 CBWD3Q5JTY5 395 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 CBWD5Q5RIA9 395 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 TTI2Q6NXR4 508 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 FOXR2Q6PJQ5 311 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 SLC35C1Q96A29 364 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 CLDN23Q96B33 292 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 TWNKQ96RR1 684 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 SLC22A12Q96S37 553 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 GCNT4Q9P109 453 aa23.21■■□□□ 1.31
TRAF4-204ENST00000422344 SPTBN2O15020 2390 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 F5P12259 2224 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 SPECC1L-ADORA2AF8WAN1 911 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 RPS9P46781 194 aaKnown RBP23.2■■□□□ 1.3
TRAF4-204ENST00000422344 SOX9P48436 509 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 SLC5A3P53794 718 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 STX17P56962 302 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 MAP3K7CLP57077 242 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 TNK2Q07912 1038 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 MTF1Q14872 753 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 TSSK4Q6SA08 328 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 RALGPS2Q86X27 583 aaPredicted RBP23.2■■□□□ 1.3
TRAF4-204ENST00000422344 CYFIP2Q96F07 1278 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 HNRNPABQ99729 332 aaKnown RBP23.2■■□□□ 1.3
TRAF4-204ENST00000422344 DUSP9Q99956 384 aaKnown RBP23.2■■□□□ 1.3
TRAF4-204ENST00000422344 COMMD8Q9NX08 183 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 ZSCAN32Q9NX65 697 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 KIAA1468Q9P260 1216 aa23.2■■□□□ 1.3
TRAF4-204ENST00000422344 SHISA7A6NL88 538 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 CTHP32929 405 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 CETN1Q12798 172 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 PDGFRLQ15198 375 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 ZNF394Q53GI3 561 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 ZBTB44Q8NCP5 570 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 SH3RF2Q8TEC5 729 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 OVCA2Q8WZ82 227 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 SMOQ99835 787 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 FAM83CQ9BQN1 747 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 FAM124BQ9H5Z6 455 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-204ENST00000422344 CISHQ9NSE2 258 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 ARHGAP26Q9UNA1 814 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 COQ4Q9Y3A0 265 aa23.19■■□□□ 1.3
TRAF4-204ENST00000422344 FGFR1OPO95684 399 aaKnown RBP23.18■■□□□ 1.3
TRAF4-204ENST00000422344 GNA14O95837 355 aa23.18■■□□□ 1.3
TRAF4-204ENST00000422344 IFNAR2P48551 515 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms