RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PPP6CO00743 305 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 MYF5P13349 255 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 FMO1Q01740 532 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 POLD3Q15054 466 aaPredicted RBP4.95□□□□□ -1.62
LINC00397-201ENST00000422074 ARHGAP29Q52LW3 1261 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 RNASE12Q5GAN4 147 aaKnown RBP4.95□□□□□ -1.62
LINC00397-201ENST00000422074 NAPRTQ6XQN6 538 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 CATSPERGQ6ZRH7 1159 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 CHSY1Q86X52 802 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 RAB11FIP4Q86YS3 637 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 SFTPA1Q8IWL2 248 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 MPP5Q8N3R9 675 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 GALNT4Q8N4A0 578 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 TERB1Q8NA31 727 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 C8orf58Q8NAV2 365 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 SMG7Q92540 1137 aaKnown RBP4.95□□□□□ -1.62
LINC00397-201ENST00000422074 CTHRC1Q96CG8 243 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 DAZAP1Q96EP5 407 aaKnown RBP4.95□□□□□ -1.62
LINC00397-201ENST00000422074 RITA1Q96K30 269 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 MSLNLQ96KJ4 702 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 ZNF778Q96MU6 729 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 PRR25Q96S07 402 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 PPP1R9BQ96SB3 815 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 TRIM36Q9NQ86 728 aa4.95□□□□□ -1.62
LINC00397-201ENST00000422074 AFF4Q9UHB7 1163 aaKnown RBP4.95□□□□□ -1.62
LINC00397-201ENST00000422074 TCRBV5S1A1TA0A578 114 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 CD3EAPO15446 510 aaKnown RBP4.94□□□□□ -1.62
LINC00397-201ENST00000422074 CHRM5P08912 532 aaPredicted RBP4.94□□□□□ -1.62
LINC00397-201ENST00000422074 PRR35P0CG20 571 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 KELP23276 732 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 EPHB2P29323 1055 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 UQCRC1P31930 480 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 GKP32189 559 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 ZNF81P51508 661 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 PRKAG1P54619 331 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 TIRAPP58753 221 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 E2F1Q01094 437 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 SRSF7Q16629 238 aaKnown RBP eCLIP4.94□□□□□ -1.62
LINC00397-201ENST00000422074 SPARTQ8N0X7 666 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 MYO1HQ8N1T3 1032 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 SCARB1Q8WTV0 552 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 TMEM171Q8WVE6 324 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 LRTOMTQ8WZ04 291 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 ASB2Q96Q27 587 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 DPCDQ9BVM2 203 aaPredicted RBP4.94□□□□□ -1.62
LINC00397-201ENST00000422074 LRRC27Q9C0I9 530 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 GAR1Q9NY12 217 aaKnown RBP4.94□□□□□ -1.62
LINC00397-201ENST00000422074 COL20A1Q9P218 1284 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 DDX20Q9UHI6 824 aaKnown RBP4.94□□□□□ -1.62
LINC00397-201ENST00000422074 TCEAL9Q9UHQ7 104 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 CAPN11Q9UMQ6 739 aa4.94□□□□□ -1.62
LINC00397-201ENST00000422074 DRG1Q9Y295 367 aaKnown RBP4.94□□□□□ -1.62
LINC00397-201ENST00000422074 WDR91A4D1P6 747 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 GOLGA6CA6NDK9 693 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 GOLGA6BA6NDN3 693 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 GOLIM4O00461 696 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 TPP1O14773 563 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 RRP9O43818 475 aaKnown RBP4.93□□□□□ -1.62
LINC00397-201ENST00000422074 PMPCBO75439 489 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 VNN1O95497 513 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 FGAP02671 866 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 GOLGA6DP0CG33 693 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 IL1R1P14778 569 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 EPHA3P29320 983 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 FAM193AP78312 1265 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 MTX3Q5HYI7 312 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 L1TD1Q5T7N2 865 aaKnown RBP4.93□□□□□ -1.62
LINC00397-201ENST00000422074 RNF220Q5VTB9 566 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 MORN5Q5VZ52 161 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 ZNF626Q68DY1 528 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 FCRL6Q6DN72 434 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 C11orf87Q6NUJ2 197 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 ANKRD13AQ8IZ07 590 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 GALNT16Q8N428 558 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 SIRT6Q8N6T7 355 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 FAM156AQ8NDB6 213 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 DNAJB14Q8TBM8 379 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 ZNF398Q8TD17 642 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 BHMT2Q9H2M3 363 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 SACM1LQ9NTJ5 587 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 GOLGA6AQ9NYA3 693 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 CCNL1Q9UK58 526 aaPredicted RBP4.93□□□□□ -1.62
LINC00397-201ENST00000422074 AMFRQ9UKV5 643 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 TBC1D30Q9Y2I9 924 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 CACNA1IQ9P0X4 2223 aa4.93□□□□□ -1.62
LINC00397-201ENST00000422074 CYP2D7A0A087X1C5 515 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 SMIM22K7EJ46 135 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 AP4M1O00189 453 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 BRAFP15056 766 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 RPL17P18621 184 aaKnown RBP4.92□□□□□ -1.62
LINC00397-201ENST00000422074 PRKAR1BP31321 381 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 RENBPP51606 427 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 PSG6Q00889 435 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 ARHGEF7Q14155 803 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 GRM3Q14832 879 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 ZNF750Q32MQ0 723 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 GFOD2Q3B7J2 385 aa4.92□□□□□ -1.62
LINC00397-201ENST00000422074 TMEM63BQ5T3F8 832 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms