RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 F8VZ95 297 aa13.34□□□□□ -0.27
SCAF8-203ENST00000417268 SGPL1O95470 568 aa13.34□□□□□ -0.27
SCAF8-203ENST00000417268 FAM228BP0C875 321 aa13.34□□□□□ -0.27
SCAF8-203ENST00000417268 GRK4P32298 578 aa13.34□□□□□ -0.27
SCAF8-203ENST00000417268 C4orf32Q8N8J7 132 aa13.34□□□□□ -0.27
SCAF8-203ENST00000417268 TMEM176AQ96HP8 235 aa13.34□□□□□ -0.27
SCAF8-203ENST00000417268 FAM96AQ9H5X1 160 aa13.34□□□□□ -0.27
SCAF8-203ENST00000417268 PCDHB12Q9Y5F1 795 aa13.34□□□□□ -0.27
SCAF8-203ENST00000417268 PI4K2BG5E9Z4 385 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 SUPT3HO75486 399 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 HSPA8P11142 646 aaKnown RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 ACADSP16219 412 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 ITIH2P19823 946 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 ICAM3P32942 547 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 ALDH18A1P54886 795 aaKnown RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 MRPS6P82932 125 aaKnown RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 DNAJC3Q13217 504 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 GFM2Q969S9 779 aaKnown RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 VPS39Q96JC1 886 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 GPR20Q99678 358 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 THTPAQ9BU02 230 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 MMTAG2Q9BU76 263 aaKnown RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 BFARQ9NZS9 450 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 CDY2AQ9Y6F7 541 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 MROH7Q68CQ1 1323 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 TLR2O60603 784 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 CAND2O75155 1236 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 TOMM70O94826 608 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 NCAM1P13591 858 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 EIF3EP60228 445 aaKnown RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 ZNF235Q14590 738 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 FUKQ8N0W3 1084 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 PDP2Q9P2J9 529 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 MID2Q9UJV3 735 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 USP20Q9Y2K6 914 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 B2RBV5 119 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 KCNJ1P48048 391 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 GCNT1Q02742 428 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 TBX2Q13207 712 aaPredicted RBP13.33□□□□□ -0.28
SCAF8-203ENST00000417268 BOLA3Q53S33 107 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 BRI3BPQ8WY22 251 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 FAM129AQ9BZQ8 928 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 WDR70Q9NW82 654 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 RBPJLQ9UBG7 517 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 LZTS1Q9Y250 596 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 DUOX1Q9NRD9 1551 aa13.33□□□□□ -0.28
SCAF8-203ENST00000417268 RNF103-CHMP3A0A140T963 221 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 LACTBL1A8MY62 500 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 ANKRD63C9JTQ0 380 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 LSM8O95777 96 aaKnown RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 S100BP04271 92 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 HMBSP08397 361 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 COMTP21964 271 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 CAPSQ13938 189 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 CYLC2Q14093 348 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 TRIP10Q15642 601 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 PID1Q7Z2X4 250 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 ANKMY2Q8IV38 441 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 SNRNP27Q8WVK2 155 aaKnown RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 MAML3Q96JK9 1138 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 MAGEA13PA6NCF6 341 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 ARSEP51690 589 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 RCN1Q15293 331 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 APLFQ8IW19 511 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 MIEF2Q96C03 454 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 METTL5Q9NRN9 209 aaKnown RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 BARX2Q9UMQ3 279 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 ZSCAN5CA6NGD5 496 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 SLC2A3P11169 496 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 PTENP60484 403 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 BTG3Q14201 252 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 DAB2IPQ5VWQ8 1189 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 OVOS1Q6IE37 1185 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 THAP11Q96EK4 314 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 KRT82Q9NSB4 513 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.32□□□□□ -0.286e-9■■■■□ 25.1
SCAF8-203ENST00000417268 HAO1Q9UJM8 370 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 COL1A2P08123 1366 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 DUSP11O75319 330 aaKnown RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 RECQL4O94761 1208 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 CCNE2O96020 404 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 AMHP03971 560 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 ELNP15502 786 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 PRMT2P55345 433 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 IKBKEQ14164 716 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 ACCSLQ4AC99 568 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 C10orf120Q5SQS8 335 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 DLK2Q6UY11 383 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 EPS8L3Q8TE67 593 aaKnown RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 DACT3Q96B18 629 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-203ENST00000417268 C15orf41Q9Y2V0 281 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 SH3BP1Q9Y3L3 701 aa13.32□□□□□ -0.28
SCAF8-203ENST00000417268 DFFAO00273 331 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms