RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NFIL3Q16649 462 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 GAB4Q2WGN9 574 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 EML3Q32P44 896 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 DGKKQ5KSL6 1271 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 KIAA2013Q8IYS2 634 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 ZMIZ2Q8NF64 920 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 ATRIPQ8WXE1 791 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 TWNKQ96RR1 684 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 KCNK16Q96T55 309 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 APOBEC3GQ9HC16 384 aaKnown RBP16.07■□□□□ 0.16
UBXN4-203ENST00000416538 TRDMT1O14717 391 aaKnown RBP16.06■□□□□ 0.16
UBXN4-203ENST00000416538 TNFRSF10BO14763 440 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 BEST1O76090 585 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 TCF3P15923 654 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 PIK3CAP42336 1068 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 CXCL12P48061 93 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 PGFP49763 221 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 AP3M2P53677 418 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 LPAL2Q16609 132 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 ACOT1Q86TX2 421 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 FMR1NBQ8N0W7 255 aaPredicted RBP16.06■□□□□ 0.16
UBXN4-203ENST00000416538 GUF1Q8N442 669 aaKnown RBP16.06■□□□□ 0.16
UBXN4-203ENST00000416538 SCAMP5Q8TAC9 235 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 TAS1R2Q8TE23 839 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 OSCP1Q8WVF1 389 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 RUBCNQ92622 972 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 ERCC4Q92889 916 aaPredicted RBP16.06■□□□□ 0.16
UBXN4-203ENST00000416538 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 CEP295NLQ96MC4 621 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 LINC00597Q9H2U6 94 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 ECT2Q9H8V3 914 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 KRT82Q9NSB4 513 aa16.06■□□□□ 0.16
UBXN4-203ENST00000416538 DUS2Q9NX74 493 aaKnown RBP16.06■□□□□ 0.16
UBXN4-203ENST00000416538 MAPK13O15264 365 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 CALUO43852 315 aaPredicted RBP16.05■□□□□ 0.16
UBXN4-203ENST00000416538 CLSTN1O94985 981 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 HDCP19113 662 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 GCLMP48507 274 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 VAMP7P51809 220 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 NDST1P52848 882 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 HEATR6Q6AI08 1181 aaKnown RBP16.05■□□□□ 0.16
UBXN4-203ENST00000416538 CC2D1AQ6P1N0 951 aaPredicted RBP16.05■□□□□ 0.16
UBXN4-203ENST00000416538 ZFRQ96KR1 1074 aaKnown RBP16.05■□□□□ 0.16
UBXN4-203ENST00000416538 SMOQ99835 787 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 FAM126AQ9BYI3 521 aaPredicted RBP16.05■□□□□ 0.16
UBXN4-203ENST00000416538 FAM49BQ9NUQ9 324 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 SMPD4Q9NXE4 827 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 TRPM5Q9NZQ8 1165 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 ATP6V1DQ9Y5K8 247 aa16.05■□□□□ 0.16
UBXN4-203ENST00000416538 SPTBN2O15020 2390 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 LEFTY2O00292 366 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 RNF40O75150 1001 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 TGM1P22735 817 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 IFNAR2P48551 515 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 SLC5A3P53794 718 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 SLC7A9P82251 487 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 MESP2Q0VG99 397 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 GPRIN1Q7Z2K8 1008 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 FAM186BQ8IYM0 893 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 C12orf29Q8N999 325 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 ENGASEQ8NFI3 743 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 RMDN1Q96DB5 314 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 DCBLD2Q96PD2 775 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 MMRN2Q9H8L6 949 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 PARD6AQ9NPB6 346 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 IL37Q9NZH6 218 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 FRMD4BQ9Y2L6 1034 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 CPQQ9Y646 472 aa16.04■□□□□ 0.16
UBXN4-203ENST00000416538 NUP205Q92621 2012 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 IKBKBO14920 756 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 HRO43593 1189 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 CYP17A1P05093 508 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 CHRM1P11229 460 aaPredicted RBP16.03■□□□□ 0.16
UBXN4-203ENST00000416538 OPRD1P41143 372 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 GALK1P51570 392 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 PMS1P54277 932 aaKnown RBP16.03■□□□□ 0.16
UBXN4-203ENST00000416538 MCCD1P59942 119 aaPredicted RBP16.03■□□□□ 0.16
UBXN4-203ENST00000416538 INCA1Q0VD86 236 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 SGSM1Q2NKQ1 1148 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 NUP93Q8N1F7 819 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 SYNPOQ8N3V7 929 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 CPA6Q8N4T0 437 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 SLC2A14Q8TDB8 520 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 WHAMMQ8TF30 809 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 SEMA4DQ92854 862 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 WBP2Q969T9 261 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 SMARCD1Q96GM5 515 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 P2RY13Q9BPV8 354 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 DMAP1Q9NPF5 467 aaPredicted RBP16.03■□□□□ 0.16
UBXN4-203ENST00000416538 GMIPQ9P107 970 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 NCDNQ9UBB6 729 aa16.03■□□□□ 0.16
UBXN4-203ENST00000416538 FAM92AA1XBS5 289 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 AP1G2O75843 785 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 ABL1P00519 1130 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 PFKLP17858 780 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 YWHAQP27348 245 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 PXNP49023 591 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms