RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 EHD4Q9H223 541 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 RPS6KL1Q9Y6S9 549 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 TMEM120BA0PK00 339 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 STX7O15400 261 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 ITGB6P18564 788 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 TCEA2Q15560 299 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 RPAINQ86UA6 219 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 MIER2Q8N344 545 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 OTUB1Q96FW1 271 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 IARS2Q9NSE4 1012 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 AKAP3O75969 853 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 MICAL2O94851 1124 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 CNGA3Q16281 694 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 NAPEPLDQ6IQ20 393 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 NOA1Q8NC60 698 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 ZIM3Q96PE6 472 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 SMPD4Q9NXE4 827 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 PPP2R3BQ9Y5P8 575 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 AGTP01019 485 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 SNRPAP09012 282 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 C16orf87Q6PH81 154 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 CLEC4FQ8N1N0 589 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 SERPINB9P50453 376 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 ACVR2BQ13705 512 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 TRADDQ15628 312 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 RABGAP1LQ5R372 815 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 LINC00523Q86TU6 105 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 ZBTB45Q96K62 511 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 FHDC1Q9C0D6 1143 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 EPN3Q9H201 632 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 OSGEPL1Q9H4B0 414 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 RIOX1Q9H6W3 641 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 CDH16O75309 829 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 NDST1P52848 882 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 PATL1Q86TB9 770 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 BTN2A2Q8WVV5 523 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 CELF6Q96J87 481 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 NFKBIZQ9BYH8 718 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 SMG5Q9UPR3 1016 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 FAM32AQ9Y421 112 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 PSTPIP1O43586 416 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 LHX1P48742 406 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 CCNI2Q6ZMN8 369 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 ZNF473Q8WTR7 871 aaKnown RBP11.01□□□□□ -0.65
COL12A1-203ENST00000416123 MYH6P13533 1939 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 PCDH8O95206 1070 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 CPA2P48052 419 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 ABCE1P61221 599 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 FSCN1Q16658 493 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 RARS2Q5T160 578 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 CFAP99D6REC4 459 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 ZNF189O75820 626 aaPredicted RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 ANXA9O76027 345 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 SLC2A3P11169 496 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 GEMIN4P57678 1058 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 GRIK5Q16478 980 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 TEDDM1Q5T9Z0 273 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 WDR49Q8IV35 697 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 SCUBE3Q8IX30 993 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 GPC2Q8N158 579 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 GALNT4Q8N4A0 578 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 RXFP2Q8WXD0 754 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 PPP1R2P1Q96PQ5 205 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 ERGIC2Q96RQ1 377 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 DDX5P17844 614 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 CENPCQ03188 943 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 FBXO47Q5MNV8 452 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 GRAMD1AQ96CP6 724 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 TLR8Q9NR97 1041 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 BCL9O00512 1426 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 RRM1P23921 792 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 C11orf63Q6NUN7 778 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 SLC44A2Q8IWA5 706 aaPredicted RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 MAGEB10Q96LZ2 347 aaPredicted RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 MANSC1Q9H8J5 431 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 PCNAP12004 261 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 ANO5Q75V66 913 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 JADE3Q92613 823 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 HES6Q96HZ4 224 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 DSEQ9UL01 958 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 LACTBL1A8MY62 500 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 SYNCRIPO60506 623 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 CLASP2O75122 1294 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 TRIM16O95361 564 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 RHOCP08134 193 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 OTUD4Q01804 1114 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 C16orf59Q7L2K0 433 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 PARP9Q8IXQ6 854 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 STAMBPL1Q96FJ0 436 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 AP4E1Q9UPM8 1137 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 SPATA31D1Q6ZQQ2 1576 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 CAND2O75155 1236 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 SKAP2O75563 359 aaPredicted RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 SH3BGRP55822 239 aaPredicted RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 APOBEC3HQ6NTF7 200 aaKnown RBP11□□□□□ -0.65
COL12A1-203ENST00000416123 PDCD2LQ9BRP1 358 aa11□□□□□ -0.65
COL12A1-203ENST00000416123 F8VZ95 297 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 MOB2Q70IA6 237 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 HERC6Q8IVU3 1022 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms