RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 FBXO21O94952 628 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 ABL1P00519 1130 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 RGS7P49802 495 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 MAMLD1Q13495 774 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 ARHGAP29Q52LW3 1261 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 PPP1R15BQ5SWA1 713 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 PM20D1Q6GTS8 502 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 RTL10Q7L3V2 364 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 ARCQ7LC44 396 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 SLC35G2Q8TBE7 412 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 LRRC4Q9HBW1 653 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 MRPL47Q9HD33 250 aaKnown RBP15.01□□□□□ -0.01
SF3B1-204ENST00000414963 CNGB3Q9NQW8 809 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 ST7Q9NRC1 585 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 COMMD8Q9NX08 183 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 TJP2Q9UDY2 1190 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 SALL4Q9UJQ4 1053 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 USP3Q9Y6I4 520 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 SCINQ9Y6U3 715 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 GBF1Q92538 1859 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 PLXNA4Q9HCM2 1894 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 SIGLEC16A6NMB1 481 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 ESPNB1AK53 854 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 LPXNO60711 386 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 SEC24AO95486 1093 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 MSNP26038 577 aaKnown RBP15□□□□□ -0.01
SF3B1-204ENST00000414963 IRS1P35568 1242 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 TKTL1P51854 596 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 CDR1P51861 262 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 C2CD6Q53TS8 623 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 CYP4A22Q5TCH4 519 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 PLPP4Q5VZY2 271 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 OLFML1Q6UWY5 402 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 SCN4BQ8IWT1 228 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 SCUBE3Q8IX30 993 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 C17orf53Q8N3J3 647 aaPredicted RBP15□□□□□ -0.01
SF3B1-204ENST00000414963 TTC9BQ8N6N2 239 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 MICAL1Q8TDZ2 1067 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 ARNTL2Q8WYA1 636 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 LZTFL1Q9NQ48 299 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 TRIM10Q9UDY6 481 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 SLC27A5Q9Y2P5 690 aa15□□□□□ -0.01
SF3B1-204ENST00000414963 FAM92AA1XBS5 289 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 SART1O43290 800 aaKnown RBP14.99□□□□□ -0.01
SF3B1-204ENST00000414963 TGM5O43548 720 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 GLI1P08151 1106 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 KLRC2P26717 231 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 SLC6A3Q01959 620 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 ADIGQ0VDE8 80 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 IFI16Q16666 785 aaKnown RBP14.99□□□□□ -0.01
SF3B1-204ENST00000414963 DDR2Q16832 855 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 MGAT5BQ3V5L5 792 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 DNAJC24Q6P3W2 148 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 FAM183BPQ6ZVS7 135 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 SLC26A9Q7LBE3 791 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 GPRIN1Q7Z2K8 1008 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 NUP93Q8N1F7 819 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 HDAC7Q8WUI4 952 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 IRGQQ8WZA9 623 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 KHSRPQ92945 711 aaKnown RBP eCLIP14.99□□□□□ -0.015e-10■■■■□ 23.9
SF3B1-204ENST00000414963 NUP85Q9BW27 656 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 CERS4Q9HA82 394 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 ASNSD1Q9NWL6 643 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 CTTNBP2NLQ9P2B4 639 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 MYO1AQ9UBC5 1043 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 LCMT1Q9UIC8 334 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 GUCA1BQ9UMX6 200 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 COG5Q9UP83 839 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 LAMA2P24043 3122 aaKnown RBP14.99□□□□□ -0.01
SF3B1-204ENST00000414963 PTPRDP23468 1912 aa14.99□□□□□ -0.01
SF3B1-204ENST00000414963 TMEM265A0A087WTH1 108 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 FAM170AA1A519 330 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 TMEM191CA6NGB0 347 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 EPOPA6NHQ4 379 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
SF3B1-204ENST00000414963 ZNF500O60304 480 aaPredicted RBP14.98□□□□□ -0.01
SF3B1-204ENST00000414963 RTN3O95197 1032 aaPredicted RBP14.98□□□□□ -0.01
SF3B1-204ENST00000414963 ZBED1O96006 694 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 KRT3P12035 628 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 LCP1P13796 627 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 ATF6P18850 670 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 ELF1P32519 619 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 CLCN4P51793 760 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 SLC5A3P53794 718 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 MRPS5P82675 430 aaKnown RBP14.98□□□□□ -0.01
SF3B1-204ENST00000414963 EFHC1Q5JVL4 640 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 OR6B2Q6IFH4 312 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 LLGL2Q6P1M3 1020 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 SIX6OS1Q8N1H7 587 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 TPCN2Q8NHX9 752 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 FEZF2Q8TBJ5 459 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 SLC22A17Q8WUG5 538 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 UBE2Q2Q8WVN8 375 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 SEPT5Q99719 369 aaPredicted RBP14.98□□□□□ -0.01
SF3B1-204ENST00000414963 ULBP1Q9BZM6 244 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 FBXO44Q9H4M3 255 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 CYP4F11Q9HBI6 524 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 TMEM59LQ9UK28 342 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 FBXW11Q9UKB1 542 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 SCML2Q9UQR0 700 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms