RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TARSP26639 723 aaKnown RBP15.7■□□□□ 0.1
LIMS4-201ENST00000413601 SOX9P48436 509 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 KPNA1P52294 538 aaPredicted RBP15.7■□□□□ 0.1
LIMS4-201ENST00000413601 TNK2Q07912 1038 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 LRMPQ12912 555 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 ZNF268Q14587 947 aaPredicted RBP15.7■□□□□ 0.1
LIMS4-201ENST00000413601 HEXIM2Q96MH2 286 aaKnown RBP15.7■□□□□ 0.1
LIMS4-201ENST00000413601 IPO9Q96P70 1041 aaKnown RBP15.7■□□□□ 0.1
LIMS4-201ENST00000413601 SLITRK1Q96PX8 696 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 NELL2Q99435 816 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 KIF9Q9HAQ2 790 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 CSNK1G1Q9HCP0 422 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 RWDD2AQ9UIY3 292 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 NDRG2Q9UN36 371 aaKnown RBP15.7■□□□□ 0.1
LIMS4-201ENST00000413601 MAN2B1O00754 1011 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 FAM200BP0CF97 657 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 PPP3CCP48454 512 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 SLC5A3P53794 718 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 RAD23BP54727 409 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 PLCB2Q00722 1185 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 CUL2Q13617 745 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 PPP1R26Q5T8A7 1209 aaPredicted RBP15.69■□□□□ 0.1
LIMS4-201ENST00000413601 TTC39CQ8N584 583 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 SLC4A11Q8NBS3 891 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 FAM3CQ92520 227 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 ATOH1Q92858 354 aaPredicted RBP15.69■□□□□ 0.1
LIMS4-201ENST00000413601 FBXO32Q969P5 355 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 JAKMIP2Q96AA8 810 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 MED15Q96RN5 788 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 OSBPL6Q9BZF3 934 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 DNAI2Q9GZS0 605 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 RNF38Q9H0F5 515 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 FAM86C1Q9NVL1 165 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 IL37Q9NZH6 218 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 CHORDC1Q9UHD1 332 aaPredicted RBP15.69■□□□□ 0.1
LIMS4-201ENST00000413601 MRPS17Q9Y2R5 130 aaKnown RBP15.69■□□□□ 0.1
LIMS4-201ENST00000413601 CACNA1IQ9P0X4 2223 aa15.69■□□□□ 0.1
LIMS4-201ENST00000413601 MYOFQ9NZM1 2061 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 PMM2O15305 246 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 FGFR1OPO95684 399 aaKnown RBP15.68■□□□□ 0.1
LIMS4-201ENST00000413601 GNA14O95837 355 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 PDE6CP51160 858 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 MLLT6P55198 1093 aaPredicted RBP15.68■□□□□ 0.1
LIMS4-201ENST00000413601 MARSP56192 900 aaKnown RBP15.68■□□□□ 0.1
LIMS4-201ENST00000413601 KCNH2Q12809 1159 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 FZD5Q13467 585 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 ANGPT1Q15389 498 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 ZNF77Q15935 545 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 TRIM68Q6AZZ1 485 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 CC2D1AQ6P1N0 951 aaPredicted RBP15.68■□□□□ 0.1
LIMS4-201ENST00000413601 CLEC20AQ6ZU45 233 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 TRIM59Q8IWR1 403 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 MLKLQ8NB16 471 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 SH3RF2Q8TEC5 729 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 TMEM176AQ96HP8 235 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 GBP4Q96PP9 640 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 PHOX2BQ99453 314 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 FAM83CQ9BQN1 747 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 IRF2BPLQ9H1B7 796 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 EBF3Q9H4W6 596 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 F5P12259 2224 aa15.68■□□□□ 0.1
LIMS4-201ENST00000413601 HHLA1C9JL84 531 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 SPECC1L-ADORA2AF8WAN1 911 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 NCAM2O15394 837 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 OAS1P00973 400 aaKnown RBP15.67■□□□□ 0.1
LIMS4-201ENST00000413601 CCDC192P0DO97 292 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 ARSAP15289 507 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 PFKLP17858 780 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 CTHP32929 405 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 ZXDBP98169 803 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 USP4Q13107 963 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 MTF1Q14872 753 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 ITPRIPL2Q3MIP1 535 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 GPRIN1Q7Z2K8 1008 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 CREBRFQ8IUR6 639 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 ZNF687Q8N1G0 1237 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 PDZD8Q8NEN9 1154 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 LMO3Q8TAP4 145 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 OVCA2Q8WZ82 227 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 CLDN23Q96B33 292 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 NT5C1BQ96P26 610 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 DUSP16Q9BY84 665 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 FAM124BQ9H5Z6 455 aaPredicted RBP15.67■□□□□ 0.1
LIMS4-201ENST00000413601 C8orf33Q9H7E9 229 aaPredicted RBP15.67■□□□□ 0.1
LIMS4-201ENST00000413601 HPS4Q9NQG7 708 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 COMMD8Q9NX08 183 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 GMIPQ9P107 970 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 ARHGAP26Q9UNA1 814 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIMS4-201ENST00000413601 ATG2BQ96BY7 2078 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 FANCMQ8IYD8 2048 aa15.67■□□□□ 0.1
LIMS4-201ENST00000413601 FAM92AA1XBS5 289 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 OTOL1A6NHN0 477 aaPredicted RBP15.66■□□□□ 0.1
LIMS4-201ENST00000413601 P4HA2O15460 535 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 OLFM2O95897 454 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 AFPP02771 609 aaKnown RBP15.66■□□□□ 0.1
LIMS4-201ENST00000413601 TBXAS1P24557 533 aaPredicted RBP15.66■□□□□ 0.1
LIMS4-201ENST00000413601 PGFP49763 221 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 YWHAEP62258 255 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms