RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 SLITRK6Q9H5Y7 841 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 CSNK1G1Q9HCP0 422 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPSF4-202ENST00000412686 DNAJC12Q9UKB3 198 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 ATP8B3O60423 1300 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 MYO10Q9HD67 2058 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 FAM170AA1A519 330 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 C2orf78A6NCI8 922 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 SMTNL1A8MU46 457 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 ANHXE9PGG2 379 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 PIK3R2O00459 728 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 TNFRSF10BO14763 440 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 MICAL2O94851 1124 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 VDRP11473 427 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 CDC25CP30307 473 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 VIPR2P41587 438 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 PDE4CQ08493 712 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 RAPGEF1Q13905 1077 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 GRM2Q14416 872 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 SYCP1Q15431 976 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 SGO2Q562F6 1265 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 KLHDC7AQ5VTJ3 777 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 PIGZQ86VD9 579 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 NUP93Q8N1F7 819 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 TTC39CQ8N584 583 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 MAB21L3Q8N8X9 362 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 RNF214Q8ND24 703 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 RIN3Q8TB24 985 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 SHC3Q92529 594 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 NDRG1Q92597 394 aaKnown RBP8.16□□□□□ -1.1
CPSF4-202ENST00000412686 TRMT2BQ96GJ1 504 aaKnown RBP8.16□□□□□ -1.1
CPSF4-202ENST00000412686 MYRFLQ96LU7 910 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 ASB16Q96NS5 453 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 LRRC3BQ96PB8 259 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 GCNAQ96QF7 691 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 TTLL2Q9BWV7 592 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 DUSP16Q9BY84 665 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 GANQ9H2C0 597 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 TASP1Q9H6P5 420 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 TRPC7Q9HCX4 862 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 FAM207AQ9NSI2 230 aaPredicted RBP8.16□□□□□ -1.1
CPSF4-202ENST00000412686 GMIPQ9P107 970 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 CHORDC1Q9UHD1 332 aaPredicted RBP8.16□□□□□ -1.1
CPSF4-202ENST00000412686 CNTN6Q9UQ52 1028 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 SIK3Q9Y2K2 1263 aa8.16□□□□□ -1.1
CPSF4-202ENST00000412686 HELZP42694 1942 aaKnown RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 FAM86C2PA6NEL3 165 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 LRRC10BA6NIK2 292 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 M0QYV0 167 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 FOXN3O00409 490 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 CYP26A1O43174 497 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 DCXO43602 365 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 ABL1P00519 1130 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 PAEPP09466 180 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 UCHL3P15374 230 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 YWHAQP27348 245 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 GNA15P30679 374 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 RGS7P49802 495 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 MFAP3P55082 362 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 POLR2FP61218 127 aaKnown RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 UBXN1Q04323 297 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 DRAP1Q14919 205 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 PKDCCQ504Y2 493 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 FKBP15Q5T1M5 1219 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 DENND1BQ6P3S1 775 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 LRSAM1Q6UWE0 723 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 VITQ6UXI7 678 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 ENOSF1Q7L5Y1 443 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 ARID3BQ8IVW6 561 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 SLC44A3Q8N4M1 653 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 ARL14EPQ8N8R7 260 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 ANKRD52Q8NB46 1076 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 ANKRD20A12PQ8NF67 263 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 MRPS31Q92665 395 aaKnown RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 SMARCD2Q92925 531 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 SECISBP2LQ93073 1101 aaKnown RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 FBXO32Q969P5 355 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 PCMTD1Q96MG8 357 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 NAP1L5Q96NT1 182 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 CYP2S1Q96SQ9 504 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 NAA15Q9BXJ9 866 aaKnown RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 FAM124BQ9H5Z6 455 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 NLRC4Q9NPP4 1024 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 GDE1Q9NZC3 331 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 UXTQ9UBK9 157 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.15□□□□□ -1.1
CPSF4-202ENST00000412686 SORCS3Q9UPU3 1222 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 CCL26Q9Y258 94 aa8.15□□□□□ -1.1
CPSF4-202ENST00000412686 COL4A2P08572 1712 aa8.15□□□□□ -1.11
CPSF4-202ENST00000412686 TICRRQ7Z2Z1 1910 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 ZNF840PA6NDX5 716 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 HEPACAM2A8MVW5 462 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 F8VZ95 297 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 PI4K2BG5E9Z4 385 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 SCAMP3O14828 347 aaKnown RBP8.14□□□□□ -1.11
CPSF4-202ENST00000412686 MDM4O15151 490 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 THAP12O43422 761 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 FGF19O95750 216 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 TPM2P07951 284 aa8.14□□□□□ -1.11
CPSF4-202ENST00000412686 USP17L7P0C7H9 530 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms