RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 UTRNP46939 3433 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 MGAMO43451 1857 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 EPHX2P34913 555 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 MNAT1P51948 309 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 DPYSL3Q14195 570 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 NOMO1Q15155 1222 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 GRIK4Q16099 956 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 DCAF4L1Q3SXM0 396 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 FAM133BQ5BKY9 247 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 DARS2Q6PI48 645 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 C3orf62Q6ZUJ4 267 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 PEBP4Q96S96 227 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 PLEKHA5Q9HAU0 1116 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 GBA2Q9HCG7 927 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 KLHL14Q9P2G3 628 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 PRKAG3Q9UGI9 489 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 DERAQ9Y315 318 aa12.01□□□□□ -0.49
TRAFD1-202ENST00000412615 CLUHO75153 1309 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 DESP17661 470 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 CYP3A5P20815 502 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 SSTR1P30872 391 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 FOXN2P32314 431 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 SNX16P57768 344 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 ROR1Q01973 937 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 PDK2Q15119 407 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 GOLGA7BQ2TAP0 167 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 BOLA3Q53S33 107 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 ZC3H12AQ5D1E8 599 aaKnown RBP12□□□□□ -0.49
TRAFD1-202ENST00000412615 SH3PXD2AQ5TCZ1 1133 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 CCDC63Q8NA47 563 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 ACSS3Q9H6R3 686 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12□□□□□ -0.49
TRAFD1-202ENST00000412615 CFAP73A6NFT4 308 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 BANF1O75531 89 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 SETSIPP0DME0 302 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 CA4P22748 312 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 GBP2P32456 591 aaPredicted RBP12□□□□□ -0.49
TRAFD1-202ENST00000412615 BASP1P80723 227 aaKnown RBP12□□□□□ -0.49
TRAFD1-202ENST00000412615 GAD2Q05329 585 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 RNASELQ05823 741 aaKnown RBP12□□□□□ -0.49
TRAFD1-202ENST00000412615 MMRN1Q13201 1228 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 KRT81Q14533 505 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 C15orf59Q2T9L4 293 aaPredicted RBP12□□□□□ -0.49
TRAFD1-202ENST00000412615 MSS51Q4VC12 460 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 C9orf131Q5VYM1 1079 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 RGS9BPQ6ZS82 235 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 PARP9Q8IXQ6 854 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 FBXO36Q8NEA4 188 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 MRRFQ96E11 262 aaKnown RBP12□□□□□ -0.49
TRAFD1-202ENST00000412615 RNF157Q96PX1 679 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 NCAPGQ9BPX3 1015 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 KATNBL1Q9H079 304 aa12□□□□□ -0.49
TRAFD1-202ENST00000412615 SSU72Q9NP77 194 aaKnown RBP12□□□□□ -0.49
TRAFD1-202ENST00000412615 PDHXO00330 501 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 PIK3R2O00459 728 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 TMEM63AO94886 807 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 UBOX5O94941 541 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 SNAI1O95863 264 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 PFKMP08237 780 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 ACVR2BQ13705 512 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 CDO1Q16878 200 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 BBS9Q3SYG4 887 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 GALNTL6Q49A17 601 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 MARCH8Q5T0T0 291 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 RNF43Q68DV7 783 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 TRNP1Q6NT89 227 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 CYP4V2Q6ZWL3 525 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 ZC3H18Q86VM9 953 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 C4orf33Q8N1A6 199 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 TAB3Q8N5C8 712 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 C12orf29Q8N999 325 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 KIF9Q9HAQ2 790 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 RXFP1Q9HBX9 757 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 ZSWIM8A7E2V4 1837 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 TCRBV7S3A2A0A539 114 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 DPYSL4O14531 572 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 TYROBPO43914 113 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 SDC4P31431 198 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 MSH2P43246 934 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 RGS7P49802 495 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 CDC42EP1Q00587 391 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 CCDC14Q49A88 953 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 PPP1R26Q5T8A7 1209 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 SCYL2Q6P3W7 929 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 NPNTQ6UXI9 565 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 FBF1Q8TES7 1133 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 DHRS4Q9BTZ2 278 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 HESX1Q9UBX0 185 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 SLC45A1Q9Y2W3 748 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 STARD13Q9Y3M8 1113 aa11.99□□□□□ -0.49
TRAFD1-202ENST00000412615 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 A0A1W2PPM1 405 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 RRN3P2A6NIE6 340 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 H7C0C1 242 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 CHUKO15111 745 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms