RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SPIRE1Q08AE8 756 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 BMS1Q14692 1282 aaKnown RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 SAFBQ15424 915 aaKnown RBP eCLIP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CALCRLQ16602 461 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 NAALADL2Q58DX5 795 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 ARSHQ5FYA8 562 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 XKR9Q5GH70 373 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 SPOUT1Q5T280 376 aaKnown RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 FAM102BQ5T8I3 360 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 MEI1Q5TIA1 1274 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CDCP2Q5VXM1 449 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CRIP3Q6Q6R5 217 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 EP400NLQ6ZTU2 488 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 ANO5Q75V66 913 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 OTUD6AQ7L8S5 288 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF410Q86VK4 478 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 ECHDC2Q86YB7 292 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 JAMLQ86YT9 394 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 C4orf19Q8IY42 314 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CCDC112Q8NEF3 446 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 SPPL3Q8TCT6 385 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 P2RX5Q93086 422 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 PABPC5Q96DU9 382 aaKnown RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 DYDC2Q96IM9 177 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CEP170P1Q96L14 293 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF830Q96NB3 372 aaPredicted RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CEP89Q96ST8 783 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 FDXACB1Q9BRP7 624 aaPredicted RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 LXNQ9BS40 222 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 GCOM2Q9BZD3 368 aaPredicted RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 INO80BQ9C086 356 aaPredicted RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 TMEM117Q9H0C3 514 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 ELAC1Q9H777 363 aaKnown RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CYP26B1Q9NR63 512 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 RGL1Q9NZL6 768 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 SUCLA2Q9P2R7 463 aaPredicted RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 PCDHA12Q9UN75 941 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 TSC22D4Q9Y3Q8 395 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 PCDHB12Q9Y5F1 795 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 V9GYY5 206 aaPredicted RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 TRIP11Q15643 1979 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 TCHHQ07283 1943 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 H3BQ06 376 aaPredicted RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 NCK2O43639 380 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CSDE1O75534 798 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 PF4P02776 101 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 TPM1P09493 284 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 FGFR1P11362 822 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 TNNT1P13805 278 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 ATP2B1P20020 1258 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 SFPQP23246 707 aaKnown RBP eCLIP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 DNAJB1P25685 340 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 YWHABP31946 246 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 POLGP54098 1239 aaPredicted RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 TUBB4BP68371 445 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CYP4A11Q02928 519 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CAMK1Q14012 370 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CTTNQ14247 550 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 IQCB1Q15051 598 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 LEXMQ3ZCV2 418 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CATSPER4Q7RTX7 472 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF761Q86XN6 746 aaPredicted RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 RHPN2Q8IUC4 686 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 LRRC8AQ8IWT6 810 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 TPH2Q8IWU9 490 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 EXOC8Q8IYI6 725 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 NAT16Q8N8M0 369 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 RNF169Q8NCN4 708 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 POF1BQ8WVV4 589 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 TCP11Q8WWU5 503 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CPA5Q8WXQ8 436 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 KISS1RQ969F8 398 aaPredicted RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 PPP2R3CQ969Q6 453 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 C8orf76Q96K31 380 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 RHOVQ96L33 236 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 NLRP4Q96MN2 994 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CDK5RAP1Q96SZ6 601 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 EIF2AK1Q9BQI3 630 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 LLPHQ9BRT6 129 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 SRRTQ9BXP5 876 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CLSTN2Q9H4D0 955 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 DHX33Q9H6R0 707 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 ZSWIM4Q9H7M6 989 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CHST12Q9NRB3 414 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 AP5S1Q9NUS5 200 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 RNF19AQ9NV58 838 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 TYW1Q9NV66 732 aaKnown RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 CLDND1Q9NY35 253 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 DACT1Q9NYF0 836 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 PSD3Q9NYI0 1048 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 WRAP73Q9P2S5 460 aaPredicted RBP5.8□□□□□ -1.48
LINC00342-201ENST00000412393 SMC3Q9UQE7 1217 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 COL4A3BPQ9Y5P4 624 aa5.8□□□□□ -1.48
LINC00342-201ENST00000412393 A0A0U1RQF3 1178 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 ASAP2O43150 1006 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 FGF18O76093 207 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 SLITRK3O94933 977 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 ATE1O95260 518 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 LYPLA2O95372 231 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 SLPIP03973 132 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 372.5 ms