RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 BST2Q10589 180 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 TEAD2Q15562 447 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 POTEHQ6S545 545 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 GJD3Q8N144 294 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 SCAMP5Q8TAC9 235 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 ING5Q8WYH8 240 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 OVCA2Q8WZ82 227 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 NECAB3Q96P71 396 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 GCNAQ96QF7 691 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 ATXN3LQ9H3M9 355 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 ACP6Q9NPH0 428 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 ZMYM5Q9UJ78 669 aa16.31■□□□□ 0.2
TRAPPC12-203ENST00000411973 CUL9Q8IWT3 2517 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 XPO1O14980 1071 aaKnown RBP16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 THAP12O43422 761 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 TADA3O75528 432 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 CALCAP01258 141 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 PNMA6AP0CW24 399 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 GJA1P17302 382 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 WEE1P30291 646 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 PLA2G4AP47712 749 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 PDE4CQ08493 712 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 TAF10Q12962 218 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 ARHGAP15Q53QZ3 475 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 RAB41Q5JT25 222 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 PIGZQ86VD9 579 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 SLC35F5Q8WV83 523 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 SLITRK1Q96PX8 696 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 FBXO44Q9H4M3 255 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 CD320Q9NPF0 282 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 NLRC4Q9NPP4 1024 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 IFNKQ9P0W0 207 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 MUC3AQ02505 3323 aa16.3■□□□□ 0.2
TRAPPC12-203ENST00000411973 NUP210Q8TEM1 1887 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 ANHXE9PGG2 379 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 DDX6P26196 483 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 SOX5P35711 763 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 KIF11P52732 1056 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 FIGNQ5HY92 759 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 SNX30Q5VWJ9 437 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 SLC47A2Q86VL8 602 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 PDZD8Q8NEN9 1154 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 UBA3Q8TBC4 463 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 KCTD13Q8WZ19 329 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 MRPS31Q92665 395 aaKnown RBP16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 NXPE3Q969Y0 559 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 MCRS1Q96EZ8 462 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 ZSWIM3Q96MP5 696 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 SPAG5Q96R06 1193 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 EDEM3Q9BZQ6 932 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 TASP1Q9H6P5 420 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 LIMD1Q9UGP4 676 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 PCDHGC3Q9UN70 934 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 SCML2Q9UQR0 700 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 USP3Q9Y6I4 520 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 MYO16Q9Y6X6 1858 aa16.29■□□□□ 0.2
TRAPPC12-203ENST00000411973 ZNF840PA6NDX5 716 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 M0QYV0 167 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 TULP2O00295 520 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 TPM3P06753 285 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 ZDHHC11BP0C7U3 371 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 CYP11B1P15538 503 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 PFKLP17858 780 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 SSTR3P32745 418 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 STAT1P42224 750 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 GPD2P43304 727 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 CYP4F8P98187 520 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 PTPN21Q16825 1174 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 STXBP5Q5T5C0 1151 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 GPR158Q5T848 1215 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 MTSS1LQ765P7 747 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 MON1AQ86VX9 555 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 GAS2L3Q86XJ1 694 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 SMARCD2Q92925 531 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 SECISBP2LQ93073 1101 aaKnown RBP16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 HSFY1Q96LI6 401 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 ASB16Q96NS5 453 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 SLC46A2Q9BY10 475 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 XPO4Q9C0E2 1151 aaKnown RBP16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 TTYH3Q9C0H2 523 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 LHX5Q9H2C1 402 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 TRPV4Q9HBA0 871 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 IGSF9Q9P2J2 1179 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 MYO6Q9UM54 1294 aa16.28■□□□□ 0.2
TRAPPC12-203ENST00000411973 CBFA2T2O43439 604 aa16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 RPL34P49207 117 aaKnown RBP16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 IFRD2Q12894 506 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 HTR4Q13639 388 aa16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 FAM78AQ5JUQ0 283 aa16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 PMF1Q6P1K2 205 aa16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 CCDC186Q7Z3E2 898 aa16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 CACNA2D4Q7Z3S7 1137 aa16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 RNF135Q8IUD6 432 aa16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 ZSCAN18Q8TBC5 510 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 EPS8L1Q8TE68 723 aa16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 DDX1Q92499 740 aaKnown RBP16.27■□□□□ 0.2
TRAPPC12-203ENST00000411973 BAP1Q92560 729 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms