RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 DMXL1Q9Y485 3027 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 LEFTY2O00292 366 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 HRO43593 1189 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 NFATC1O95644 943 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 TCF3P15923 654 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 CNR2P34972 360 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 PIK3CAP42336 1068 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 PUM1Q14671 1186 aaKnown RBP eCLIP23.72■■□□□ 1.39
MSH6-202ENST00000411819 DGLUCYQ7Z3D6 616 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 TMC2Q8TDI7 906 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 FBXO32Q969P5 355 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 SCAND2PQ9GZW5 306 aaPredicted RBP23.72■■□□□ 1.39
MSH6-202ENST00000411819 SDCBP2Q9H190 292 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 LINC00597Q9H2U6 94 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 SMPD4Q9NXE4 827 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 MAPK8IP1Q9UQF2 711 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 CPQQ9Y646 472 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 MYO16Q9Y6X6 1858 aa23.72■■□□□ 1.39
MSH6-202ENST00000411819 RHOBTB3O94955 611 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 RTN3O95197 1032 aaPredicted RBP23.71■■□□□ 1.39
MSH6-202ENST00000411819 NR2F2P24468 414 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 YWHAQP27348 245 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 PXNP49023 591 aaPredicted RBP23.71■■□□□ 1.39
MSH6-202ENST00000411819 ZXDBP98169 803 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 SPEM2Q0P670 501 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 ORC1Q13415 861 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 RSPO4Q2I0M5 234 aaPredicted RBP23.71■■□□□ 1.39
MSH6-202ENST00000411819 SGSM1Q2NKQ1 1148 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 ZACNQ401N2 412 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 KRBA2Q6ZNG9 492 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 ACOT1Q86TX2 421 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 WDR5BQ86VZ2 330 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 NUP93Q8N1F7 819 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 TMEM174Q8WUU8 243 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 GOLPH3LQ9H4A5 285 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 DMAP1Q9NPF5 467 aaPredicted RBP23.71■■□□□ 1.39
MSH6-202ENST00000411819 KRT82Q9NSB4 513 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 TRAF3IP3Q9Y228 551 aa23.71■■□□□ 1.39
MSH6-202ENST00000411819 KIAA1549LQ6ZVL6 1849 aa23.7■■□□□ 1.39
MSH6-202ENST00000411819 FAM237AA0A1B0GTK4 181 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 OAS1P00973 400 aaKnown RBP23.7■■□□□ 1.38
MSH6-202ENST00000411819 MBL2P11226 248 aaPredicted RBP23.7■■□□□ 1.38
MSH6-202ENST00000411819 HOXA6P31267 233 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 LMNB2Q03252 620 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 DPYDQ12882 1025 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 FBXO43Q4G163 708 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 SPOPLQ6IQ16 392 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 SV2AQ7L0J3 742 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 PDZD8Q8NEN9 1154 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 RPLP0P6Q8NHW5 317 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 SMARCD1Q96GM5 515 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 KCNK16Q96T55 309 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 RNF38Q9H0F5 515 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 GDPD2Q9HCC8 539 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 PARD6AQ9NPB6 346 aa23.7■■□□□ 1.38
MSH6-202ENST00000411819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.7■■□□□ 1.38
MSH6-202ENST00000411819 RALGAPA1Q6GYQ0 2036 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 A0A1W2PQ27 194 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 A0A1W2PQ64 194 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 A0A1W2PQD8 194 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 SCAMP3O14828 347 aaKnown RBP23.69■■□□□ 1.38
MSH6-202ENST00000411819 AP1G2O75843 785 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 RETP07949 1114 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 CCDC130P13994 396 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 VAMP7P51809 220 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 SLC5A3P53794 718 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 SLC7A9P82251 487 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 FILIP1Q7Z7B0 1213 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 TAF4BQ92750 862 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 IMPG2Q9BZV3 1241 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 MMRN2Q9H8L6 949 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 POLR3BQ9NW08 1133 aaPredicted RBP23.69■■□□□ 1.38
MSH6-202ENST00000411819 HMGXB4Q9UGU5 601 aa23.69■■□□□ 1.38
MSH6-202ENST00000411819 IKBKBO14920 756 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 OLFM2O95897 454 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 ASS1P00966 412 aaKnown RBP23.68■■□□□ 1.38
MSH6-202ENST00000411819 HLA-DRAP01903 254 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 TRIM49P0CI25 452 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 TRIM49CP0CI26 452 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 KRT13P13646 458 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 NDST1P52848 882 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 HHIPQ96QV1 700 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 FAM49BQ9NUQ9 324 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 DLL3Q9NYJ7 618 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 CFAP97Q9P2B7 532 aa23.68■■□□□ 1.38
MSH6-202ENST00000411819 CDV3Q9UKY7 258 aaKnown RBP23.68■■□□□ 1.38
MSH6-202ENST00000411819 AKAP3O75969 853 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 CCDC192P0DO97 292 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 TRIM21P19474 475 aaKnown RBP23.67■■□□□ 1.38
MSH6-202ENST00000411819 ASPAP45381 313 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 C1orf220Q5T0J3 134 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 PAQR9Q6ZVX9 377 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 INTS8Q75QN2 995 aaKnown RBP23.67■■□□□ 1.38
MSH6-202ENST00000411819 DDX42Q86XP3 938 aaKnown RBP eCLIP23.67■■□□□ 1.38
MSH6-202ENST00000411819 FAM186BQ8IYM0 893 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 FUKQ8N0W3 1084 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 SCAMP5Q8TAC9 235 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 SLC2A14Q8TDB8 520 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 OVCA2Q8WZ82 227 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 EZH1Q92800 747 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms